Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03500

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
3,910,095	+		MIT1002_03499	0.39	+0.1
3,910,258	-		MIT1002_03499	0.53	+2.7
3,910,274	+		MIT1002_03499	0.54	+0.5
3,910,282	-		MIT1002_03499	0.55	-0.3
3,910,474	+		MIT1002_03499	0.71	+1.8
3,910,489	+		MIT1002_03499	0.72	-0.7
3,910,629	-		MIT1002_03499	0.83	+2.2
3,910,640	+		MIT1002_03499	0.84	+0.1
3,910,647	+		MIT1002_03499	0.85	-1.1
3,910,648	-		MIT1002_03499	0.85	+0.3
3,910,655	-		MIT1002_03499	0.86	-0.7
3,910,781	+				-0.3
3,910,781	+				-0.2
3,910,789	-				+0.5
3,910,801	+				+0.2
3,910,920	-				+0.2
3,910,920	-				+0.4
3,911,097	+		MIT1002_03500	0.12	+0.7
3,911,097	+		MIT1002_03500	0.12	+0.2
3,911,107	+		MIT1002_03500	0.13	-0.8
3,911,138	+		MIT1002_03500	0.17	-2.4
3,911,357	+		MIT1002_03500	0.43	-0.4
3,911,414	+		MIT1002_03500	0.50	+0.4
3,911,471	+		MIT1002_03500	0.56	-0.0
3,911,498	-		MIT1002_03500	0.60	-0.1
3,911,531	+		MIT1002_03500	0.63	-1.0
3,911,565	-		MIT1002_03500	0.68	-0.6
3,911,691	-		MIT1002_03500	0.82	-0.5
3,911,952	+				+1.4
3,911,980	+				-0.1
3,912,017	+		MIT1002_03501	0.11	-1.3
3,912,025	-		MIT1002_03501	0.11	-0.3
3,912,069	-		MIT1002_03501	0.15	+0.3
3,912,205	+		MIT1002_03501	0.27	+0.2
3,912,409	-		MIT1002_03501	0.45	-1.1
3,912,589	-		MIT1002_03501	0.60	+1.7
3,912,604	+		MIT1002_03501	0.61	-2.3
3,912,604	+		MIT1002_03501	0.61	-0.2
3,912,604	+		MIT1002_03501	0.61	+0.8
3,912,604	+		MIT1002_03501	0.61	+0.6
3,912,604	+		MIT1002_03501	0.61	-1.2
3,912,604	+		MIT1002_03501	0.61	+0.8
3,912,604	+		MIT1002_03501	0.61	+1.1
3,912,604	+		MIT1002_03501	0.61	+0.1
3,912,604	+		MIT1002_03501	0.61	-0.3
3,912,612	-		MIT1002_03501	0.62	-0.7
3,912,612	-		MIT1002_03501	0.62	+0.2
3,912,612	-		MIT1002_03501	0.62	-2.2
3,912,612	-		MIT1002_03501	0.62	+0.7
3,912,612	-		MIT1002_03501	0.62	-0.5
3,912,612	-		MIT1002_03501	0.62	+0.7
3,912,612	-		MIT1002_03501	0.62	-1.1
3,912,612	-		MIT1002_03501	0.62	+0.4
3,912,612	-		MIT1002_03501	0.62	-0.2
3,912,612	-		MIT1002_03501	0.62	-0.2