Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03494

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
3,901,948	-				-2.8
3,902,038	+				+1.4
3,902,038	+				+1.6
3,902,086	+				+1.4
3,902,110	+				+0.6
3,902,178	-		MIT1002_03493	0.13	-2.4
3,902,183	+		MIT1002_03493	0.14	-2.4
3,902,215	+		MIT1002_03493	0.21	-0.8
3,902,215	+		MIT1002_03493	0.21	-0.3
3,902,221	+		MIT1002_03493	0.23	+0.2
3,902,320	+		MIT1002_03493	0.44	-0.9
3,902,320	+		MIT1002_03493	0.44	-1.1
3,902,331	+		MIT1002_03493	0.46	-1.9
3,902,376	-		MIT1002_03493	0.56	-0.6
3,902,412	+		MIT1002_03493	0.64	-1.5
3,902,602	+				+1.5
3,902,607	+				+0.5
3,902,614	+				+0.3
3,902,744	+		MIT1002_03494	0.14	+1.1
3,902,744	+		MIT1002_03494	0.14	+1.4
3,902,744	+		MIT1002_03494	0.14	-1.0
3,902,744	+		MIT1002_03494	0.14	-0.2
3,902,744	+		MIT1002_03494	0.14	-2.7
3,902,752	-		MIT1002_03494	0.16	-0.3
3,902,754	+		MIT1002_03494	0.16	-0.4
3,902,754	+		MIT1002_03494	0.16	-1.7
3,902,762	-		MIT1002_03494	0.17	-0.0
3,902,764	-		MIT1002_03494	0.17	+0.2
3,902,764	-		MIT1002_03494	0.17	-0.2
3,902,808	+		MIT1002_03494	0.24	+0.9
3,902,810	-		MIT1002_03494	0.24	+0.8
3,902,816	-		MIT1002_03494	0.25	-0.1
3,902,849	+		MIT1002_03494	0.30	+0.7
3,902,939	-		MIT1002_03494	0.43	+0.1
3,902,971	+		MIT1002_03494	0.48	-0.8
3,902,979	-		MIT1002_03494	0.49	-0.7
3,902,979	-		MIT1002_03494	0.49	+0.8
3,902,979	-		MIT1002_03494	0.49	+0.1
3,903,002	+		MIT1002_03494	0.52	+0.2
3,903,010	+		MIT1002_03494	0.53	-0.3
3,903,010	-		MIT1002_03494	0.53	+1.7
3,903,034	-		MIT1002_03494	0.57	-0.3
3,903,059	-		MIT1002_03494	0.61	-1.7
3,903,082	+		MIT1002_03494	0.64	+1.4
3,903,082	+		MIT1002_03494	0.64	-0.2
3,903,090	-		MIT1002_03494	0.65	+1.7
3,903,090	-		MIT1002_03494	0.65	-0.0
3,903,090	-		MIT1002_03494	0.65	+0.4
3,903,090	-		MIT1002_03494	0.65	+0.1
3,903,135	-		MIT1002_03494	0.72	-2.9
3,903,187	-		MIT1002_03494	0.79	-3.7
3,903,209	+		MIT1002_03494	0.82	-0.0
3,903,225	+		MIT1002_03494	0.85	+0.4
3,903,233	-		MIT1002_03494	0.86	-0.1
3,903,233	-		MIT1002_03494	0.86	-0.2
3,903,235	+		MIT1002_03494	0.86	+0.3
3,903,238	-		MIT1002_03494	0.87	+0.5
3,903,255	-		MIT1002_03494	0.89	+1.1
3,903,394	-				+0.1
3,903,477	+				+0.6
3,903,482	+				-0.3
3,903,484	+				+1.0
3,903,519	-				+1.3
3,903,521	+				+0.2
3,903,527	+				+3.0
3,903,613	+				+0.3
3,903,646	-				-0.6
3,903,778	-				+0.9
3,903,823	+				-2.8
3,903,831	-		MIT1002_03495	0.10	-1.3
3,903,831	-		MIT1002_03495	0.10	-0.6
3,903,845	+		MIT1002_03495	0.11	+0.1
3,903,845	+		MIT1002_03495	0.11	+0.0
3,903,847	+		MIT1002_03495	0.11	-1.4
3,903,857	-		MIT1002_03495	0.11	+0.4
3,903,871	-		MIT1002_03495	0.11	-0.2
3,903,917	-		MIT1002_03495	0.13	+0.1
3,904,038	+		MIT1002_03495	0.17	-1.4
3,904,041	+		MIT1002_03495	0.17	+1.6
3,904,044	-		MIT1002_03495	0.17	-0.4
3,904,046	+		MIT1002_03495	0.17	+0.3
3,904,049	-		MIT1002_03495	0.17	-0.7
3,904,049	-		MIT1002_03495	0.17	+1.8
3,904,060	-		MIT1002_03495	0.18	+1.3
3,904,116	+		MIT1002_03495	0.20	+0.1
3,904,121	+		MIT1002_03495	0.20	+0.9
3,904,179	+		MIT1002_03495	0.22	+0.4
3,904,179	+		MIT1002_03495	0.22	+1.7
3,904,187	-		MIT1002_03495	0.22	-0.4
3,904,189	+		MIT1002_03495	0.22	+0.5
3,904,242	+		MIT1002_03495	0.24	+0.4
3,904,242	-		MIT1002_03495	0.24	-0.9
3,904,274	-		MIT1002_03495	0.25	-0.1
3,904,281	-		MIT1002_03495	0.25	-0.6
3,904,296	+		MIT1002_03495	0.26	+1.3
3,904,304	-		MIT1002_03495	0.26	+0.1
3,904,304	-		MIT1002_03495	0.26	-0.4
3,904,323	-		MIT1002_03495	0.26	+0.5