Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03160

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
3,523,444	-		MIT1002_03159	0.56	-0.7
3,523,444	-		MIT1002_03159	0.56	-0.1
3,523,444	-		MIT1002_03159	0.56	+1.0
3,523,467	-		MIT1002_03159	0.57	+0.3
3,523,474	+		MIT1002_03159	0.58	-0.4
3,523,476	+		MIT1002_03159	0.58	-1.1
3,523,484	+		MIT1002_03159	0.58	+1.1
3,523,484	-		MIT1002_03159	0.58	-0.1
3,523,533	+		MIT1002_03159	0.61	+0.3
3,523,562	-		MIT1002_03159	0.63	+0.3
3,523,588	-		MIT1002_03159	0.64	-1.6
3,523,606	+		MIT1002_03159	0.65	-0.2
3,523,763	+		MIT1002_03159	0.74	+0.1
3,523,769	-		MIT1002_03159	0.74	+0.1
3,523,771	-		MIT1002_03159	0.74	+0.3
3,523,773	+		MIT1002_03159	0.74	-0.9
3,523,773	+		MIT1002_03159	0.74	+0.1
3,523,792	+		MIT1002_03159	0.75	-1.0
3,523,923	-		MIT1002_03159	0.82	-0.1
3,523,980	-		MIT1002_03159	0.86	-0.3
3,524,027	+		MIT1002_03159	0.88	+1.1
3,524,027	+		MIT1002_03159	0.88	+0.8
3,524,035	-		MIT1002_03159	0.89	+0.1
3,524,065	+				-0.4
3,524,075	+				-0.9
3,524,077	+				+0.4
3,524,092	+				+1.1
3,524,099	-				+0.7
3,524,139	-				+0.5
3,524,181	-				-0.6
3,524,181	-				-0.1
3,524,282	+				+1.0
3,524,290	-				-0.4
3,524,290	-				+2.0
3,524,418	+				+1.7
3,524,418	+				+0.1
3,524,585	-		MIT1002_03160	0.19	-0.1
3,524,590	-		MIT1002_03160	0.20	-0.4
3,524,633	+		MIT1002_03160	0.24	-0.8
3,524,636	-		MIT1002_03160	0.24	-1.4
3,524,643	+		MIT1002_03160	0.25	+1.5
3,524,648	+		MIT1002_03160	0.25	+0.4
3,524,652	-		MIT1002_03160	0.26	+0.4
3,524,667	+		MIT1002_03160	0.27	-3.0
3,524,782	+		MIT1002_03160	0.39	-0.1
3,524,879	-		MIT1002_03160	0.49	+0.2
3,524,881	+		MIT1002_03160	0.49	-0.8
3,524,881	+		MIT1002_03160	0.49	+1.1
3,524,894	-		MIT1002_03160	0.50	+1.3
3,524,897	+		MIT1002_03160	0.50	-0.4
3,524,897	+		MIT1002_03160	0.50	-0.2
3,524,924	+		MIT1002_03160	0.53	-1.5
3,524,927	-		MIT1002_03160	0.53	-0.7
3,524,931	-		MIT1002_03160	0.54	+0.0
3,524,931	-		MIT1002_03160	0.54	-0.7
3,524,998	-		MIT1002_03160	0.61	-0.1
3,524,999	+		MIT1002_03160	0.61	-2.1
3,525,007	-		MIT1002_03160	0.62	-0.5
3,525,007	-		MIT1002_03160	0.62	+0.5
3,525,017	+		MIT1002_03160	0.63	+0.9
3,525,067	-		MIT1002_03160	0.68	-2.3
3,525,110	+		MIT1002_03160	0.72	+0.2
3,525,118	-		MIT1002_03160	0.73	-1.3
3,525,133	-		MIT1002_03160	0.74	+0.4
3,525,164	+		MIT1002_03160	0.77	+0.7
3,525,172	-		MIT1002_03160	0.78	-0.2
3,525,192	-		MIT1002_03160	0.80	-0.5
3,525,337	+				-0.0
3,525,446	+				-0.9
3,525,454	-				-1.3
3,525,468	-				-0.7
3,525,538	+		MIT1002_03161	0.13	+1.3
3,525,546	-		MIT1002_03161	0.15	-0.6
3,525,556	-		MIT1002_03161	0.17	-0.2
3,525,556	-		MIT1002_03161	0.17	-0.3
3,525,562	+		MIT1002_03161	0.18	-0.3
3,525,603	-		MIT1002_03161	0.25	+0.8
3,525,628	+		MIT1002_03161	0.29	-0.9
3,525,637	+		MIT1002_03161	0.31	-0.8
3,525,692	-		MIT1002_03161	0.40	-0.3
3,525,752	+		MIT1002_03161	0.51	-1.7
3,525,780	-		MIT1002_03161	0.56	-4.8
3,525,782	+		MIT1002_03161	0.56	-0.7
3,525,805	-		MIT1002_03161	0.60	+0.3
3,525,841	-		MIT1002_03161	0.66	-0.8
3,525,851	+		MIT1002_03161	0.68	+0.4
3,525,874	+		MIT1002_03161	0.72	-1.9
3,525,882	-		MIT1002_03161	0.73	+0.4
3,525,887	-		MIT1002_03161	0.74	-0.1
3,525,887	-		MIT1002_03161	0.74	-1.2
3,525,903	-		MIT1002_03161	0.77	+0.1
3,526,041	+				-0.8
3,526,049	-				+1.5
3,526,107	+				+1.2
3,526,142	+				-0.6
3,526,142	+				+0.6
3,526,150	-				-0.9
3,526,170	+				+0.9
3,526,205	+				+0.7
3,526,213	-				+0.3
3,526,213	-				+0.3
3,526,213	-				+1.6
3,526,215	+				+0.5
3,526,215	+				+0.6
3,526,215	-				+0.2
3,526,223	-				-0.1
3,526,223	-				-0.1
3,526,244	-				+0.1
3,526,346	-		MIT1002_03162	0.35	-2.7