Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02653

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
2,948,681	-				-0.9
2,948,733	-				+0.2
2,948,824	+		MIT1002_02652	0.15	-0.5
2,948,832	-		MIT1002_02652	0.16	+0.2
2,948,839	+		MIT1002_02652	0.17	-0.0
2,948,852	-		MIT1002_02652	0.19	-0.7
2,948,858	+		MIT1002_02652	0.20	+0.5
2,948,915	+		MIT1002_02652	0.27	+1.3
2,948,940	-		MIT1002_02652	0.30	-0.3
2,948,984	+		MIT1002_02652	0.36	+1.2
2,948,999	-		MIT1002_02652	0.38	-0.0
2,949,014	-		MIT1002_02652	0.39	+1.0
2,949,048	+		MIT1002_02652	0.44	-0.1
2,949,055	+		MIT1002_02652	0.45	+0.5
2,949,056	-		MIT1002_02652	0.45	-0.1
2,949,057	-		MIT1002_02652	0.45	+0.8
2,949,063	-		MIT1002_02652	0.46	+0.0
2,949,147	+		MIT1002_02652	0.56	+0.1
2,949,232	+		MIT1002_02652	0.67	+1.7
2,949,314	+		MIT1002_02652	0.77	+0.2
2,949,331	-		MIT1002_02652	0.80	+1.2
2,949,337	-		MIT1002_02652	0.80	-0.5
2,949,500	+				+1.0
2,949,530	-				-3.0
2,949,646	+				+0.4
2,949,783	+		MIT1002_02653	0.47	-2.7
2,949,812	-		MIT1002_02653	0.56	-2.6