Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02600

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
2,899,435	-		MIT1002_02598	0.84	-0.2
2,899,435	-		MIT1002_02598	0.84	-1.6
2,899,544	+				+0.5
2,899,554	+				+3.2
2,899,668	+				+2.8
2,899,676	-				-0.3
2,899,728	-		MIT1002_02599	0.19	+0.9
2,899,735	+		MIT1002_02599	0.20	-1.4
2,899,754	+		MIT1002_02599	0.25	+1.7
2,899,762	-		MIT1002_02599	0.27	+0.7
2,899,830	+		MIT1002_02599	0.44	+0.5
2,899,830	+		MIT1002_02599	0.44	+0.1
2,899,919	+		MIT1002_02599	0.66	-0.2
2,899,961	+		MIT1002_02599	0.77	+0.5
2,899,998	+		MIT1002_02599	0.86	-1.1
2,900,120	-				+0.3
2,900,148	+				+0.2
2,900,297	+				-1.5
2,900,310	-				-0.1
2,900,341	+				-2.2
2,900,349	-				+0.5
2,900,349	-				-0.3
2,900,349	-				+0.6
2,900,388	+				-0.1
2,900,479	+		MIT1002_02600	0.15	-1.8
2,900,592	-		MIT1002_02600	0.32	-1.0
2,900,592	-		MIT1002_02600	0.32	+0.6
2,900,675	-		MIT1002_02600	0.44	-0.1
2,900,764	+		MIT1002_02600	0.56	+0.6
2,900,772	-		MIT1002_02600	0.57	+1.3
2,900,776	+		MIT1002_02600	0.58	-1.0
2,900,794	-		MIT1002_02600	0.61	-0.5
2,900,842	+		MIT1002_02600	0.68	+0.3
2,900,896	+		MIT1002_02600	0.75	-1.2
2,900,922	-		MIT1002_02600	0.79	-1.1
2,900,929	+		MIT1002_02600	0.80	-0.6
2,900,938	-		MIT1002_02600	0.81	-0.3
2,900,938	-		MIT1002_02600	0.81	-0.3
2,901,054	+				+1.5
2,901,062	-				+0.0
2,901,143	-				+1.6
2,901,144	+				+1.2
2,901,161	-				+0.4
2,901,269	+		MIT1002_02601	0.11	+0.2
2,901,269	+		MIT1002_02601	0.11	+0.3
2,901,270	+		MIT1002_02601	0.11	+0.3
2,901,375	+		MIT1002_02601	0.28	-0.7
2,901,383	-		MIT1002_02601	0.29	-0.2
2,901,400	-		MIT1002_02601	0.32	+0.3
2,901,462	+		MIT1002_02601	0.42	+1.0
2,901,462	+		MIT1002_02601	0.42	-0.4
2,901,462	+		MIT1002_02601	0.42	+1.0
2,901,462	+		MIT1002_02601	0.42	+0.2
2,901,469	-		MIT1002_02601	0.43	-2.0
2,901,501	+		MIT1002_02601	0.48	+1.6
2,901,501	+		MIT1002_02601	0.48	+0.2
2,901,590	+		MIT1002_02601	0.62	-0.0
2,901,598	-		MIT1002_02601	0.63	-0.2
2,901,598	-		MIT1002_02601	0.63	-0.3
2,901,613	-		MIT1002_02601	0.66	+0.2
2,901,636	+		MIT1002_02601	0.70	-0.4
2,901,743	-		MIT1002_02601	0.87	-0.7
2,901,778	+				+0.9
2,901,797	+				-0.6
2,901,805	-				-0.0
2,901,805	-				-0.4
2,901,823	-				-0.9
2,901,844	+				+0.8
2,901,876	+				+0.9
2,901,884	+				-0.1
2,901,891	-				+1.7
2,901,933	+				+0.1
2,901,933	+				+0.4
2,901,934	+				-0.0
2,901,941	-				-3.7
2,901,941	-				+0.0
2,901,941	-				-0.1