Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02225

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
2,485,532	-		MIT1002_02223	0.84	-2.6
2,485,647	-				-1.0
2,485,758	+		MIT1002_02224	0.12	-0.5
2,485,761	-		MIT1002_02224	0.13	-1.1
2,485,761	-		MIT1002_02224	0.13	-0.0
2,485,823	-		MIT1002_02224	0.22	+1.5
2,485,823	-		MIT1002_02224	0.22	-0.5
2,485,873	-		MIT1002_02224	0.30	+0.7
2,485,962	+		MIT1002_02224	0.44	+0.5
2,485,964	+		MIT1002_02224	0.45	+0.4
2,486,023	+		MIT1002_02224	0.54	-0.7
2,486,048	+		MIT1002_02224	0.58	+1.2
2,486,051	+		MIT1002_02224	0.58	-0.3
2,486,051	+		MIT1002_02224	0.58	+0.1
2,486,116	-		MIT1002_02224	0.69	-0.1
2,486,158	+		MIT1002_02224	0.75	-0.2
2,486,165	+		MIT1002_02224	0.76	-0.1
2,486,165	+		MIT1002_02224	0.76	+0.4
2,486,173	-		MIT1002_02224	0.78	+0.2
2,486,173	-		MIT1002_02224	0.78	+0.1
2,486,262	+				+0.2
2,486,270	-				+0.1
2,486,270	-				-0.4
2,486,483	-				-1.3
2,486,553	+				-2.8
2,486,585	-		MIT1002_02225	0.13	-1.3
2,486,628	-		MIT1002_02225	0.19	-0.9
2,486,757	+		MIT1002_02225	0.37	-0.9
2,486,792	+		MIT1002_02225	0.41	+0.9
2,486,792	+		MIT1002_02225	0.41	-1.8
2,486,797	+		MIT1002_02225	0.42	-0.8
2,486,799	+		MIT1002_02225	0.42	-3.1
2,486,800	-		MIT1002_02225	0.42	-0.2
2,486,805	-		MIT1002_02225	0.43	-1.6
2,486,835	+		MIT1002_02225	0.47	-2.5
2,486,946	+		MIT1002_02225	0.62	-1.6
2,486,954	-		MIT1002_02225	0.64	+0.0
2,486,954	-		MIT1002_02225	0.64	-2.6
2,486,954	-		MIT1002_02225	0.64	-1.2
2,486,955	-		MIT1002_02225	0.64	-2.5
2,486,991	+		MIT1002_02225	0.69	-2.3
2,486,991	+		MIT1002_02225	0.69	-0.7
2,486,991	+		MIT1002_02225	0.69	-1.0
2,486,991	+		MIT1002_02225	0.69	-4.3
2,487,060	-		MIT1002_02225	0.78	-1.3
2,487,109	+		MIT1002_02225	0.85	-1.2
2,487,117	+		MIT1002_02225	0.86	-1.6
2,487,127	+		MIT1002_02225	0.87	+0.7
2,487,203	-				-0.1
2,487,270	-				-0.1
2,487,386	+		MIT1002_02226	0.11	-0.9
2,487,386	+		MIT1002_02226	0.11	+1.1
2,487,394	-		MIT1002_02226	0.12	+0.2
2,487,535	+		MIT1002_02226	0.26	-0.2
2,487,562	-		MIT1002_02226	0.29	-2.9
2,487,622	-		MIT1002_02226	0.35	-1.2
2,487,626	+		MIT1002_02226	0.35	-1.7
2,487,634	+		MIT1002_02226	0.36	+0.1
2,487,704	-		MIT1002_02226	0.43	-1.6
2,487,719	-		MIT1002_02226	0.45	-1.2
2,487,736	+		MIT1002_02226	0.46	-0.7
2,487,737	+		MIT1002_02226	0.46	-2.1
2,487,745	-		MIT1002_02226	0.47	-0.7
2,487,745	-		MIT1002_02226	0.47	-0.9
2,487,768	+		MIT1002_02226	0.49	-1.6
2,487,864	-		MIT1002_02226	0.59	-0.7
2,487,873	-		MIT1002_02226	0.60	-1.2
2,487,877	+		MIT1002_02226	0.60	-0.1
2,488,018	+		MIT1002_02226	0.74	-0.8
2,488,026	-		MIT1002_02226	0.75	-1.4
2,488,053	-		MIT1002_02226	0.78	+0.5
2,488,056	+		MIT1002_02226	0.78	-1.6
2,488,064	+		MIT1002_02226	0.79	-0.7
2,488,072	-		MIT1002_02226	0.80	+0.6
2,488,072	-		MIT1002_02226	0.80	-2.3
2,488,117	+		MIT1002_02226	0.84	-0.6
2,488,141	+		MIT1002_02226	0.87	-1.0
2,488,144	-		MIT1002_02226	0.87	-0.4
2,488,144	-		MIT1002_02226	0.87	-2.8
2,488,144	-		MIT1002_02226	0.87	+0.5
2,488,159	+		MIT1002_02226	0.89	-1.9
2,488,205	+				-1.3
2,488,211	-				-2.8
2,488,219	+				-1.1