Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02035

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
2,284,761	+		MIT1002_02034	0.83	-0.9
2,284,769	-		MIT1002_02034	0.83	-0.5
2,284,798	+		MIT1002_02034	0.84	+0.5
2,284,886	+		MIT1002_02034	0.86	-1.1
2,284,913	+		MIT1002_02034	0.86	-1.1
2,284,963	+		MIT1002_02034	0.87	-0.8
2,284,963	+		MIT1002_02034	0.87	-1.7
2,284,963	+		MIT1002_02034	0.87	-0.3
2,284,963	+		MIT1002_02034	0.87	-1.1
2,284,971	-		MIT1002_02034	0.88	-1.4
2,285,025	-		MIT1002_02034	0.89	-1.2
2,285,084	+		MIT1002_02034	0.90	-0.6
2,285,110	-				+0.2
2,285,117	+				-1.0
2,285,125	-				+0.0
2,285,125	-				-2.0
2,285,125	-				-0.7
2,285,144	+				-0.2
2,285,210	-				-0.2
2,285,231	+				-0.5
2,285,280	-				-0.9
2,285,324	-				+0.3
2,285,371	+				+0.4
2,285,397	+				-1.3
2,285,397	+				-0.6
2,285,397	+				-2.0
2,285,397	+				+1.9
2,285,405	-				-0.4
2,285,405	-				+0.1
2,285,405	-				-1.0
2,285,405	-				+0.9
2,285,405	-				-0.5
2,285,489	+				-0.5
2,285,489	+				-2.9
2,285,497	-				+0.3
2,285,543	-				+0.5
2,285,544	-				-2.1
2,285,709	-				-3.3
2,286,266	+		MIT1002_02035	0.52	-3.5
2,286,269	-		MIT1002_02035	0.53	-2.8
2,286,427	-		MIT1002_02035	0.68	-2.9
2,286,816	+				-0.6
2,286,845	-				-0.9
2,286,907	+				+0.2
2,286,930	+				-0.4
2,286,986	+				-0.3
2,286,986	+				+0.1
2,287,003	+				+1.2
2,287,028	+		MIT1002_02036	0.10	-0.2
2,287,030	+		MIT1002_02036	0.10	-1.4
2,287,030	+		MIT1002_02036	0.10	-0.8
2,287,030	+		MIT1002_02036	0.10	-2.2
2,287,030	+		MIT1002_02036	0.10	-0.1
2,287,036	-		MIT1002_02036	0.11	+0.8
2,287,038	-		MIT1002_02036	0.11	-0.2
2,287,038	-		MIT1002_02036	0.11	-0.8
2,287,038	-		MIT1002_02036	0.11	+0.1
2,287,038	-		MIT1002_02036	0.11	-0.9
2,287,046	+		MIT1002_02036	0.11	+0.2
2,287,061	+		MIT1002_02036	0.12	-0.4
2,287,094	-		MIT1002_02036	0.13	-0.0
2,287,197	+		MIT1002_02036	0.18	-2.3
2,287,233	+		MIT1002_02036	0.20	-2.1
2,287,281	+		MIT1002_02036	0.22	-2.3
2,287,287	+		MIT1002_02036	0.23	-3.4
2,287,294	-		MIT1002_02036	0.23	-1.1
2,287,363	-		MIT1002_02036	0.26	-1.7
2,287,389	-		MIT1002_02036	0.28	+0.1
2,287,450	-		MIT1002_02036	0.30	+0.9
2,287,458	+		MIT1002_02036	0.31	-0.6
2,287,469	+		MIT1002_02036	0.31	+2.0
2,287,497	-		MIT1002_02036	0.33	+1.3
2,287,530	-		MIT1002_02036	0.34	-0.4
2,287,597	-		MIT1002_02036	0.37	+0.6
2,287,651	-		MIT1002_02036	0.40	+1.1
2,287,720	-		MIT1002_02036	0.43	-0.9