Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01317

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
1,462,648	-		MIT1002_01316	0.44	-1.0
1,462,684	-		MIT1002_01316	0.47	-3.5
1,462,696	+		MIT1002_01316	0.48	-5.1
1,462,715	+		MIT1002_01316	0.50	-3.1
1,462,723	-		MIT1002_01316	0.50	-3.9
1,462,762	+		MIT1002_01316	0.53	-4.4
1,462,800	+		MIT1002_01316	0.56	-3.2
1,462,804	+		MIT1002_01316	0.57	-3.1
1,462,839	-		MIT1002_01316	0.59	-7.0
1,462,938	-		MIT1002_01316	0.67	-3.7
1,462,971	-		MIT1002_01316	0.70	-1.3
1,462,977	-		MIT1002_01316	0.70	-5.2
1,462,981	+		MIT1002_01316	0.71	-4.6
1,462,985	+		MIT1002_01316	0.71	-4.8
1,463,016	+		MIT1002_01316	0.74	-2.0
1,463,060	+		MIT1002_01316	0.77	-2.6
1,463,078	-		MIT1002_01316	0.79	-4.6
1,463,091	-		MIT1002_01316	0.80	-3.8
1,463,091	-		MIT1002_01316	0.80	-3.6
1,463,149	+		MIT1002_01316	0.84	-2.1
1,463,224	+				-4.7
1,463,224	+				-2.0
1,463,224	+				-2.7
1,463,244	+				-4.1
1,463,244	+				-3.9
1,463,252	-				-4.2
1,463,264	-				-4.9
1,463,448	-				-6.4
1,463,699	+				+0.5
1,463,707	-				-1.0
1,463,707	-				+0.2
1,463,718	+		MIT1002_01317	0.11	-0.0
1,463,736	-		MIT1002_01317	0.13	+0.1
1,463,742	+		MIT1002_01317	0.14	-0.4
1,463,754	-		MIT1002_01317	0.15	-1.3
1,463,754	-		MIT1002_01317	0.15	+0.2
1,463,754	-		MIT1002_01317	0.15	-2.9
1,463,890	-		MIT1002_01317	0.32	-0.8
1,463,908	-		MIT1002_01317	0.35	-1.8
1,463,929	-		MIT1002_01317	0.37	-1.3
1,463,934	-		MIT1002_01317	0.38	-0.1
1,463,967	+		MIT1002_01317	0.42	-0.3
1,463,981	+		MIT1002_01317	0.44	+0.6
1,464,133	-		MIT1002_01317	0.63	+0.5
1,464,220	+		MIT1002_01317	0.74	+0.8
1,464,220	+		MIT1002_01317	0.74	-0.7
1,464,238	-		MIT1002_01317	0.76	-0.2
1,464,265	+		MIT1002_01317	0.79	+0.2
1,464,265	+		MIT1002_01317	0.79	-1.1
1,464,265	+		MIT1002_01317	0.79	+0.2
1,464,265	+		MIT1002_01317	0.79	+0.9
1,464,265	+		MIT1002_01317	0.79	+0.6
1,464,265	+		MIT1002_01317	0.79	+1.1
1,464,265	+		MIT1002_01317	0.79	-1.2
1,464,265	+		MIT1002_01317	0.79	-0.4
1,464,265	+		MIT1002_01317	0.79	-1.6
1,464,273	-		MIT1002_01317	0.80	-0.3
1,464,273	-		MIT1002_01317	0.80	-1.6
1,464,273	-		MIT1002_01317	0.80	+1.3
1,464,273	-		MIT1002_01317	0.80	+0.1
1,464,273	-		MIT1002_01317	0.80	-0.8
1,464,315	-		MIT1002_01317	0.86	+0.6
1,464,316	-		MIT1002_01317	0.86	+0.0
1,464,317	-		MIT1002_01317	0.86	-0.2
1,464,481	+				+0.5
1,464,486	+				+0.1
1,464,514	+				+1.3
1,464,540	+		MIT1002_01318	0.14	+1.3
1,464,548	-		MIT1002_01318	0.16	-0.0
1,464,557	+		MIT1002_01318	0.19	+0.4
1,464,584	+		MIT1002_01318	0.27	+1.1
1,464,592	-		MIT1002_01318	0.29	-0.2
1,464,630	-		MIT1002_01318	0.41	+0.4
1,464,659	+		MIT1002_01318	0.50	-1.6
1,464,667	-		MIT1002_01318	0.52	+1.6
1,464,667	-		MIT1002_01318	0.52	-0.8
1,464,721	+		MIT1002_01318	0.68	-0.5
1,464,746	-		MIT1002_01318	0.76	-1.0
1,464,757	+		MIT1002_01318	0.79	-0.0
1,464,782	+		MIT1002_01318	0.86	+0.4
1,464,800	-				+1.0
1,464,875	+				+0.5
1,464,923	-				+0.3
1,465,076	+		MIT1002_01319	0.25	-1.8
1,465,076	+		MIT1002_01319	0.25	+0.1
1,465,144	-		MIT1002_01319	0.48	-3.1
1,465,177	-		MIT1002_01319	0.58	+2.6
1,465,240	-		MIT1002_01319	0.79	+0.4
1,465,374	+				+1.2
1,465,382	+				+0.2
1,465,382	-				-0.9
1,465,414	-				+0.5
1,465,416	+				-1.2
1,465,417	+				+0.3
1,465,417	+				-1.3