Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01294

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
1,432,363	+				-0.5
1,432,415	+				-0.6
1,432,430	-				-0.3
1,432,430	-				-1.4
1,432,471	+				+0.3
1,432,479	-				-1.3
1,432,479	-				-1.3
1,432,507	-				+0.7
1,432,592	+		MIT1002_01292	0.21	-1.9
1,432,592	+		MIT1002_01292	0.21	-3.4
1,432,617	-		MIT1002_01292	0.26	-1.0
1,432,617	-		MIT1002_01292	0.26	-1.0
1,432,673	+		MIT1002_01292	0.36	-1.4
1,432,682	+		MIT1002_01292	0.38	-2.0
1,432,712	-		MIT1002_01292	0.44	-1.1
1,432,784	-		MIT1002_01292	0.57	-2.7
1,432,784	-		MIT1002_01292	0.57	-3.2
1,432,808	+		MIT1002_01292	0.62	-3.1
1,432,884	-		MIT1002_01292	0.76	-3.6
1,432,890	+		MIT1002_01292	0.77	-1.3
1,432,908	-		MIT1002_01292	0.81	-1.6
1,432,969	+				-1.0
1,432,995	+				-0.1
1,433,003	-				-1.1
1,433,089	+				+0.1
1,433,164	-		MIT1002_01293	0.17	+1.4
1,433,164	-		MIT1002_01293	0.17	-0.2
1,433,280	-		MIT1002_01293	0.77	-0.5
1,433,290	-		MIT1002_01293	0.82	+0.2
1,433,290	-		MIT1002_01293	0.82	-0.3
1,433,610	+		MIT1002_01294	0.19	-0.7
1,433,610	+		MIT1002_01294	0.19	-2.0
1,433,610	+		MIT1002_01294	0.19	-0.2
1,433,618	-		MIT1002_01294	0.20	-0.9
1,433,650	+		MIT1002_01294	0.22	-0.4
1,433,655	+		MIT1002_01294	0.23	-3.5
1,433,657	-		MIT1002_01294	0.23	-1.3
1,433,700	+		MIT1002_01294	0.26	-1.1
1,433,751	-		MIT1002_01294	0.30	-1.4
1,433,805	+		MIT1002_01294	0.34	+0.6
1,433,811	-		MIT1002_01294	0.35	-2.3
1,433,824	+		MIT1002_01294	0.36	-3.2
1,433,832	-		MIT1002_01294	0.36	-0.8
1,433,906	-		MIT1002_01294	0.42	-0.4
1,433,936	+		MIT1002_01294	0.44	-1.3
1,433,953	-		MIT1002_01294	0.46	-1.1
1,433,955	+		MIT1002_01294	0.46	-0.5
1,433,962	+		MIT1002_01294	0.46	-1.6
1,433,970	-		MIT1002_01294	0.47	-2.4
1,434,002	-		MIT1002_01294	0.49	-1.9
1,434,038	-		MIT1002_01294	0.52	-1.6
1,434,047	-		MIT1002_01294	0.53	-0.2
1,434,061	+		MIT1002_01294	0.54	-1.3
1,434,128	+		MIT1002_01294	0.59	+0.1
1,434,138	+		MIT1002_01294	0.60	-0.7
1,434,138	+		MIT1002_01294	0.60	+0.4
1,434,146	-		MIT1002_01294	0.60	-1.9
1,434,213	+		MIT1002_01294	0.66	-0.8
1,434,244	+		MIT1002_01294	0.68	-0.6
1,434,261	+		MIT1002_01294	0.69	-0.7
1,434,269	-		MIT1002_01294	0.70	-2.1
1,434,354	+		MIT1002_01294	0.77	-1.4
1,434,385	-		MIT1002_01294	0.79	-0.3
1,434,459	+		MIT1002_01294	0.85	-0.8
1,434,467	-		MIT1002_01294	0.85	-0.2
1,434,467	-		MIT1002_01294	0.85	-3.0
1,434,467	-		MIT1002_01294	0.85	+1.3
1,434,513	-		MIT1002_01294	0.89	-1.7
1,434,513	-		MIT1002_01294	0.89	-1.6
1,434,539	+				+0.0
1,434,623	+				-0.1
1,434,631	-				-1.9
1,434,886	-				-3.9
1,434,902	-				-1.8
1,435,134	-		MIT1002_01295	0.38	-3.7
1,435,147	-		MIT1002_01295	0.40	-3.4
1,435,194	+		MIT1002_01295	0.46	-4.0
1,435,284	+		MIT1002_01295	0.57	-3.7
1,435,296	+		MIT1002_01295	0.58	-3.4
1,435,296	+		MIT1002_01295	0.58	-4.4
1,435,304	-		MIT1002_01295	0.59	-2.4
1,435,318	+		MIT1002_01295	0.61	-1.7
1,435,318	+		MIT1002_01295	0.61	-1.2
1,435,406	+		MIT1002_01295	0.72	-1.3
1,435,416	+		MIT1002_01295	0.74	-3.3
1,435,450	-		MIT1002_01295	0.78	-5.5
1,435,469	-		MIT1002_01295	0.80	-0.8
1,435,549	-				-2.8
1,435,549	-				-5.1
1,435,592	-				-3.2
1,435,597	-				-1.8
1,435,597	-				-4.2
1,435,635	+				-4.9
1,435,635	+				-1.6