Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01158

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 3
1,273,264	+		MIT1002_01157	0.70	-2.5
1,273,272	-		MIT1002_01157	0.70	-1.2
1,273,285	-		MIT1002_01157	0.70	-1.3
1,273,292	+		MIT1002_01157	0.71	-1.9
1,273,292	+		MIT1002_01157	0.71	-0.2
1,273,300	-		MIT1002_01157	0.71	-0.6
1,273,352	+		MIT1002_01157	0.73	-2.2
1,273,510	+		MIT1002_01157	0.78	-1.9
1,273,597	+		MIT1002_01157	0.81	-0.9
1,273,856	-				-2.6
1,274,170	-				-0.9
1,274,192	+				-0.0
1,274,195	+				+0.2
1,274,254	+				-0.3
1,274,254	-				-0.4
1,274,282	+				-0.8
1,274,290	+				+0.9
1,274,302	-				-2.0
1,274,309	+		MIT1002_01158	0.10	+0.0
1,274,314	+		MIT1002_01158	0.11	-0.7
1,274,393	-		MIT1002_01158	0.18	-1.1
1,274,393	-		MIT1002_01158	0.18	+0.2
1,274,473	+		MIT1002_01158	0.25	+1.8
1,274,481	-		MIT1002_01158	0.25	-0.5
1,274,481	-		MIT1002_01158	0.25	+0.6
1,274,481	-		MIT1002_01158	0.25	+0.5
1,274,486	-		MIT1002_01158	0.26	+1.5
1,274,487	+		MIT1002_01158	0.26	-0.2
1,274,531	+		MIT1002_01158	0.30	-0.4
1,274,531	+		MIT1002_01158	0.30	-0.5
1,274,563	-		MIT1002_01158	0.33	+1.6
1,274,567	+		MIT1002_01158	0.33	-0.9
1,274,571	-		MIT1002_01158	0.33	-0.4
1,274,573	-		MIT1002_01158	0.33	-0.4
1,274,573	-		MIT1002_01158	0.33	-1.6
1,274,605	+		MIT1002_01158	0.36	+0.3
1,274,625	-		MIT1002_01158	0.38	-1.6
1,274,775	+		MIT1002_01158	0.51	-1.6
1,274,830	+		MIT1002_01158	0.56	-1.0
1,274,858	-		MIT1002_01158	0.59	+0.9
1,274,883	-		MIT1002_01158	0.61	-0.5
1,274,924	-		MIT1002_01158	0.64	-0.8
1,274,960	-		MIT1002_01158	0.68	-0.9
1,275,018	+		MIT1002_01158	0.73	-3.5
1,275,044	+		MIT1002_01158	0.75	-0.0
1,275,079	-		MIT1002_01158	0.78	-0.5
1,275,081	+		MIT1002_01158	0.78	-0.6
1,275,208	-		MIT1002_01158	0.90	+0.4
1,275,220	+				-0.1
1,275,254	-				-1.8
1,275,305	+				-0.5
1,275,407	+		MIT1002_01159	0.20	-0.3
1,275,415	-		MIT1002_01159	0.23	-1.4
1,275,488	+		MIT1002_01159	0.49	-0.5
1,275,494	-		MIT1002_01159	0.51	+0.4
1,275,534	+		MIT1002_01159	0.65	-1.4
1,275,646	+				-1.4
1,275,646	+				-0.1
1,275,708	+				+0.5
1,275,708	+				-0.7
1,275,755	-		MIT1002_01160	0.12	-0.2
1,275,770	+		MIT1002_01160	0.14	-1.7
1,275,807	-		MIT1002_01160	0.17	-0.5
1,275,842	-		MIT1002_01160	0.21	-0.5
1,275,935	-		MIT1002_01160	0.30	+0.5
1,275,968	+		MIT1002_01160	0.33	-0.1
1,276,028	+		MIT1002_01160	0.39	-0.9
1,276,028	+		MIT1002_01160	0.39	+0.8
1,276,050	+		MIT1002_01160	0.41	+0.6
1,276,050	+		MIT1002_01160	0.41	+0.2
1,276,075	+		MIT1002_01160	0.44	+0.4
1,276,150	-		MIT1002_01160	0.51	-0.2
1,276,168	+		MIT1002_01160	0.53	-0.1
1,276,176	-		MIT1002_01160	0.54	-1.5
1,276,183	+		MIT1002_01160	0.54	+0.5
1,276,191	+		MIT1002_01160	0.55	-0.6
1,276,198	+		MIT1002_01160	0.56	-4.7
1,276,251	+		MIT1002_01160	0.61	-2.0
1,276,309	-		MIT1002_01160	0.67	+0.0
1,276,311	-		MIT1002_01160	0.67	+0.6
1,276,315	+		MIT1002_01160	0.67	-0.1
1,276,316	-		MIT1002_01160	0.67	+0.4