Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03863

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
4,326,671	-				-0.9
4,326,778	+				+0.5
4,326,783	-				+0.2
4,326,811	-				-0.1
4,326,819	-		MIT1002_03862	0.10	-0.5
4,326,868	-		MIT1002_03862	0.16	-0.5
4,326,886	-		MIT1002_03862	0.19	-0.6
4,326,977	-		MIT1002_03862	0.30	-1.4
4,326,984	+		MIT1002_03862	0.31	-0.6
4,327,035	+		MIT1002_03862	0.37	-0.1
4,327,035	+		MIT1002_03862	0.37	-2.4
4,327,040	+		MIT1002_03862	0.38	-1.3
4,327,048	-		MIT1002_03862	0.39	-0.4
4,327,048	-		MIT1002_03862	0.39	+0.2
4,327,048	-		MIT1002_03862	0.39	+0.1
4,327,088	-		MIT1002_03862	0.44	+0.1
4,327,098	-		MIT1002_03862	0.45	+1.4
4,327,105	-		MIT1002_03862	0.46	-0.0
4,327,198	+		MIT1002_03862	0.58	+0.1
4,327,218	+		MIT1002_03862	0.60	-5.9
4,327,218	+		MIT1002_03862	0.60	-0.4
4,327,218	+		MIT1002_03862	0.60	-1.0
4,327,219	-		MIT1002_03862	0.60	-2.9
4,327,225	-		MIT1002_03862	0.61	+0.4
4,327,242	+		MIT1002_03862	0.63	+1.1
4,327,262	+		MIT1002_03862	0.66	+0.0
4,327,262	+		MIT1002_03862	0.66	-0.7
4,327,270	-		MIT1002_03862	0.67	-1.1
4,327,292	+		MIT1002_03862	0.70	-1.2
4,327,305	+		MIT1002_03862	0.71	-1.0
4,327,318	-		MIT1002_03862	0.73	-1.4
4,327,378	+		MIT1002_03862	0.80	-0.0
4,327,384	+		MIT1002_03862	0.81	+2.0
4,327,396	+		MIT1002_03862	0.83	+0.0
4,327,438	-		MIT1002_03862	0.88	-0.8
4,327,463	-				+0.2
4,327,480	-				+0.2
4,327,525	-				-2.4
4,327,532	-				+2.3
4,327,559	-				-0.0
4,327,589	+				+0.1
4,327,589	+				+1.2
4,327,591	+				+2.0
4,327,599	-				+1.8
4,327,599	-				+0.7
4,327,599	-				-0.4
4,327,643	+				+0.6
4,327,645	+				-2.4
4,327,653	-				-0.2
4,327,653	-				+0.5
4,327,663	-		MIT1002_03863	0.12	-1.0
4,327,689	-		MIT1002_03863	0.23	-0.3
4,327,727	+		MIT1002_03863	0.39	-1.4
4,327,816	+		MIT1002_03863	0.77	-0.2
4,327,982	+				+0.9
4,328,000	-				+0.4
4,328,014	-				+1.9
4,328,043	-				+0.2
4,328,095	+		MIT1002_03864	0.12	-0.6
4,328,105	+		MIT1002_03864	0.13	+1.7
4,328,105	+		MIT1002_03864	0.13	+2.1
4,328,113	-		MIT1002_03864	0.13	-0.8
4,328,132	+		MIT1002_03864	0.15	-1.3
4,328,176	+		MIT1002_03864	0.17	-1.7
4,328,176	+		MIT1002_03864	0.17	-0.5
4,328,176	+		MIT1002_03864	0.17	+0.5
4,328,176	+		MIT1002_03864	0.17	-1.0
4,328,184	-		MIT1002_03864	0.18	+0.5
4,328,291	+		MIT1002_03864	0.24	-0.6
4,328,318	+		MIT1002_03864	0.26	-1.1
4,328,318	+		MIT1002_03864	0.26	-0.6
4,328,326	-		MIT1002_03864	0.27	+0.4
4,328,372	-		MIT1002_03864	0.29	+0.0
4,328,372	-		MIT1002_03864	0.29	-1.1
4,328,442	+		MIT1002_03864	0.34	+0.4
4,328,460	+		MIT1002_03864	0.35	-1.1
4,328,497	+		MIT1002_03864	0.37	+0.2
4,328,507	+		MIT1002_03864	0.38	+0.8
4,328,507	+		MIT1002_03864	0.38	-0.1
4,328,507	+		MIT1002_03864	0.38	+2.9
4,328,507	+		MIT1002_03864	0.38	+0.0
4,328,507	+		MIT1002_03864	0.38	+1.3
4,328,507	+		MIT1002_03864	0.38	-0.1
4,328,515	-		MIT1002_03864	0.38	+0.7
4,328,515	-		MIT1002_03864	0.38	+0.9
4,328,515	-		MIT1002_03864	0.38	-0.2
4,328,515	-		MIT1002_03864	0.38	+0.9
4,328,515	-		MIT1002_03864	0.38	-0.9
4,328,515	-		MIT1002_03864	0.38	-0.0
4,328,515	-		MIT1002_03864	0.38	-0.5
4,328,868	+		MIT1002_03864	0.60	-2.0