Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03805

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
4,250,605	-				+0.3
4,250,635	-				-0.1
4,250,640	-		MIT1002_03804	0.11	-0.3
4,250,664	+		MIT1002_03804	0.16	-3.0
4,250,704	+		MIT1002_03804	0.24	-1.0
4,250,831	+		MIT1002_03804	0.51	+3.0
4,250,896	-		MIT1002_03804	0.65	+0.0
4,250,896	-		MIT1002_03804	0.65	+1.6
4,250,896	-		MIT1002_03804	0.65	-0.1
4,250,915	+		MIT1002_03804	0.69	+0.1
4,250,959	+		MIT1002_03804	0.78	+0.0
4,250,959	+		MIT1002_03804	0.78	-0.2
4,250,969	+		MIT1002_03804	0.80	+0.8
4,250,969	+		MIT1002_03804	0.80	-0.1
4,250,969	+		MIT1002_03804	0.80	-0.2
4,250,969	+		MIT1002_03804	0.80	-2.9
4,250,977	-		MIT1002_03804	0.82	+2.7
4,250,977	-		MIT1002_03804	0.82	-0.6
4,250,977	-		MIT1002_03804	0.82	-3.0
4,250,977	-		MIT1002_03804	0.82	-0.6
4,250,977	-		MIT1002_03804	0.82	-0.6
4,250,977	-		MIT1002_03804	0.82	+0.1
4,250,977	-		MIT1002_03804	0.82	+1.3
4,250,977	-		MIT1002_03804	0.82	-0.2
4,250,979	+		MIT1002_03804	0.83	-0.5
4,251,026	+				-0.3
4,251,111	+				-1.4
4,251,111	+				-0.7
4,251,355	-				-0.5
4,251,661	+		MIT1002_03805	0.35	-1.8
4,252,096	-		MIT1002_03805	0.78	-2.2
4,252,106	+		MIT1002_03805	0.79	-1.3
4,252,114	-		MIT1002_03805	0.80	-3.9
4,252,114	-		MIT1002_03805	0.80	-1.6
4,252,141	+		MIT1002_03805	0.82	-0.5
4,252,246	-				-1.8
4,252,251	-				-3.8
4,252,271	-				-2.5
4,252,476	-		MIT1002_03806	0.29	-0.5
4,252,509	+		MIT1002_03806	0.36	-0.5
4,252,519	-		MIT1002_03806	0.38	-0.1
4,252,636	+		MIT1002_03806	0.61	-2.3
4,252,644	-		MIT1002_03806	0.63	-0.3
4,252,691	-		MIT1002_03806	0.72	-0.7
4,252,691	-		MIT1002_03806	0.72	-1.5
4,252,697	-		MIT1002_03806	0.74	-2.7
4,252,745	-		MIT1002_03806	0.83	-1.1
4,252,803	-				-0.8
4,252,883	+		MIT1002_03807	0.11	-1.7
4,252,891	-		MIT1002_03807	0.12	-1.9
4,252,909	-		MIT1002_03807	0.15	+0.8
4,252,919	+		MIT1002_03807	0.17	+1.3
4,252,919	+		MIT1002_03807	0.17	+0.3
4,252,927	-		MIT1002_03807	0.19	-1.3
4,253,016	-		MIT1002_03807	0.34	+0.7
4,253,021	-		MIT1002_03807	0.35	+0.0
4,253,082	-		MIT1002_03807	0.45	+0.7
4,253,119	+		MIT1002_03807	0.52	+0.1
4,253,127	-		MIT1002_03807	0.53	-0.4
4,253,129	+		MIT1002_03807	0.54	-0.0
4,253,137	-		MIT1002_03807	0.55	+1.0
4,253,178	+		MIT1002_03807	0.62	+0.7
4,253,196	-		MIT1002_03807	0.65	+0.3
4,253,232	+		MIT1002_03807	0.72	+1.1
4,253,232	+		MIT1002_03807	0.72	-0.1