Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03606

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
4,027,166	+				-1.6
4,027,174	-				+0.2
4,027,209	-				-0.0
4,027,209	-				-0.9
4,027,309	+				+0.2
4,027,324	-				-1.4
4,027,393	+				+0.9
4,027,393	+				+0.3
4,027,393	+				-0.8
4,027,405	+				-0.5
4,027,405	+				-2.5
4,027,420	-				-1.0
4,027,443	-				-1.6
4,027,505	+		MIT1002_03605	0.17	-0.4
4,027,514	-		MIT1002_03605	0.18	+1.6
4,027,636	-		MIT1002_03605	0.35	-0.3
4,027,643	-		MIT1002_03605	0.36	-0.2
4,027,678	-		MIT1002_03605	0.40	-0.7
4,027,683	+		MIT1002_03605	0.41	+0.9
4,027,704	-		MIT1002_03605	0.44	-1.7
4,027,746	-		MIT1002_03605	0.50	-1.5
4,027,753	+		MIT1002_03605	0.50	+1.1
4,027,753	+		MIT1002_03605	0.50	-1.1
4,027,753	+		MIT1002_03605	0.50	-1.4
4,027,759	-		MIT1002_03605	0.51	-1.5
4,027,761	-		MIT1002_03605	0.52	-3.0
4,027,761	-		MIT1002_03605	0.52	-1.8
4,027,767	+		MIT1002_03605	0.52	-2.6
4,027,823	+		MIT1002_03605	0.60	-1.0
4,027,831	-		MIT1002_03605	0.61	+0.1
4,027,866	+		MIT1002_03605	0.66	-1.1
4,027,874	-		MIT1002_03605	0.67	-1.1
4,027,913	+		MIT1002_03605	0.72	-1.3
4,028,033	+		MIT1002_03605	0.88	-0.1
4,028,086	+				-0.1
4,028,086	+				-0.5
4,028,102	-				+0.5
4,028,157	-				-0.4
4,028,218	+				-2.1
4,028,218	+				+0.4
4,028,228	+				-1.2
4,028,236	-				+0.5
4,028,274	-				+0.2
4,028,303	-				+0.6
4,028,348	-				+0.1
4,028,355	-				+0.4
4,028,362	+		MIT1002_03606	0.10	-2.0
4,028,362	+		MIT1002_03606	0.10	+0.0
4,028,406	-		MIT1002_03606	0.12	-0.8
4,028,450	-		MIT1002_03606	0.14	-0.5
4,028,594	+		MIT1002_03606	0.20	-0.5
4,028,617	-		MIT1002_03606	0.21	-0.4
4,028,659	+		MIT1002_03606	0.22	-1.3
4,028,801	+		MIT1002_03606	0.28	+1.2
4,028,801	+		MIT1002_03606	0.28	-1.4
4,028,809	-		MIT1002_03606	0.28	-1.1
4,028,809	-		MIT1002_03606	0.28	-0.3
4,028,809	-		MIT1002_03606	0.28	+0.4
4,028,809	-		MIT1002_03606	0.28	-1.2
4,028,812	+		MIT1002_03606	0.29	+1.7
4,028,835	+		MIT1002_03606	0.30	+0.7
4,028,891	+		MIT1002_03606	0.32	+0.0
4,028,905	+		MIT1002_03606	0.32	+0.1
4,028,926	-		MIT1002_03606	0.33	-0.7
4,029,016	+		MIT1002_03606	0.37	-0.8
4,029,052	+		MIT1002_03606	0.39	-1.8
4,029,080	-		MIT1002_03606	0.40	-0.6
4,029,085	-		MIT1002_03606	0.40	-2.1
4,029,097	-		MIT1002_03606	0.40	-0.4
4,029,147	+		MIT1002_03606	0.42	+0.4
4,029,269	-		MIT1002_03606	0.48	-0.7
4,029,310	-		MIT1002_03606	0.49	-0.3
4,029,314	+		MIT1002_03606	0.49	-0.6
4,029,324	+		MIT1002_03606	0.50	-1.1
4,029,331	-		MIT1002_03606	0.50	-1.8
4,029,355	+		MIT1002_03606	0.51	-1.8
4,029,380	-		MIT1002_03606	0.52	-3.4
4,029,382	+		MIT1002_03606	0.52	-1.1
4,029,390	-		MIT1002_03606	0.53	-0.1
4,029,390	-		MIT1002_03606	0.53	+0.5
4,029,390	-		MIT1002_03606	0.53	+0.1
4,029,392	+		MIT1002_03606	0.53	-0.8
4,029,400	-		MIT1002_03606	0.53	+0.0
4,029,400	-		MIT1002_03606	0.53	+0.5
4,029,503	-		MIT1002_03606	0.57	-0.1
4,029,605	+		MIT1002_03606	0.61	-0.2
4,029,605	+		MIT1002_03606	0.61	-1.5
4,029,648	+		MIT1002_03606	0.63	-0.8
4,029,656	-		MIT1002_03606	0.64	-2.0
4,029,687	-		MIT1002_03606	0.65	-1.1
4,029,687	-		MIT1002_03606	0.65	-2.1
4,029,720	-		MIT1002_03606	0.66	-1.3
4,029,722	-		MIT1002_03606	0.66	-0.4
4,029,743	-		MIT1002_03606	0.67	-1.8
4,029,882	+		MIT1002_03606	0.73	+0.2
4,029,901	+		MIT1002_03606	0.74	+0.2
4,029,946	+		MIT1002_03606	0.76	+0.0
4,029,954	-		MIT1002_03606	0.76	-1.6
4,029,954	-		MIT1002_03606	0.76	+0.4
4,029,965	-		MIT1002_03606	0.76	+1.1
4,029,995	+		MIT1002_03606	0.78	-1.3
4,030,107	-		MIT1002_03606	0.82	-1.1
4,030,198	+		MIT1002_03606	0.86	-3.8
4,030,334	+				-1.1
4,030,418	+				-0.1
4,030,420	-				-0.2
4,030,525	+				+1.3
4,030,603	-				-0.1
4,030,618	+				-1.7
4,030,676	+				-0.1
4,030,684	-				-0.7
4,030,684	-				-1.3
4,030,684	-				-0.1
4,030,909	-		MIT1002_03607	0.13	+0.2
4,030,950	+		MIT1002_03607	0.15	+0.7
4,030,966	+		MIT1002_03607	0.16	+0.2
4,030,990	-		MIT1002_03607	0.18	+0.7
4,030,995	-		MIT1002_03607	0.18	-2.2
4,031,004	-		MIT1002_03607	0.18	+1.4
4,031,066	+		MIT1002_03607	0.21	-2.9
4,031,073	+		MIT1002_03607	0.22	+0.7
4,031,081	-		MIT1002_03607	0.22	+0.2
4,031,138	-		MIT1002_03607	0.25	+1.1
4,031,138	-		MIT1002_03607	0.25	+1.8
4,031,153	+		MIT1002_03607	0.26	+0.3
4,031,206	-		MIT1002_03607	0.29	+0.6
4,031,266	+		MIT1002_03607	0.32	+0.5
4,031,274	-		MIT1002_03607	0.32	-1.2
4,031,299	-		MIT1002_03607	0.34	-0.7
4,031,324	+		MIT1002_03607	0.35	-1.0
4,031,386	+		MIT1002_03607	0.38	-0.7
4,031,388	+		MIT1002_03607	0.38	-2.7
4,031,388	+		MIT1002_03607	0.38	-0.7
4,031,391	-		MIT1002_03607	0.39	-0.2
4,031,396	-		MIT1002_03607	0.39	-1.8
4,031,425	-		MIT1002_03607	0.40	+0.2
4,031,432	-		MIT1002_03607	0.41	-1.3
4,031,439	+		MIT1002_03607	0.41	-0.2
4,031,447	-		MIT1002_03607	0.41	+0.7
4,031,486	-		MIT1002_03607	0.44	+0.1
4,031,492	+		MIT1002_03607	0.44	-0.4
4,031,500	-		MIT1002_03607	0.44	+0.2
4,031,500	-		MIT1002_03607	0.44	+0.5
4,031,531	+		MIT1002_03607	0.46	+0.7
4,031,534	-		MIT1002_03607	0.46	-1.1
4,031,534	-		MIT1002_03607	0.46	+0.7
4,031,534	-		MIT1002_03607	0.46	-0.5