Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03498

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,907,999	-		MIT1002_03497	0.19	+1.1
3,908,059	+		MIT1002_03497	0.25	+0.7
3,908,067	-		MIT1002_03497	0.26	+0.2
3,908,101	-		MIT1002_03497	0.30	+0.6
3,908,243	+		MIT1002_03497	0.44	-1.3
3,908,243	+		MIT1002_03497	0.44	+0.1
3,908,243	+		MIT1002_03497	0.44	+0.4
3,908,251	-		MIT1002_03497	0.45	+0.0
3,908,303	+		MIT1002_03497	0.51	-0.3
3,908,346	+		MIT1002_03497	0.55	-1.5
3,908,353	-		MIT1002_03497	0.56	+1.3
3,908,457	-		MIT1002_03497	0.67	+1.0
3,908,457	-		MIT1002_03497	0.67	-0.2
3,908,468	+		MIT1002_03497	0.68	+0.7
3,908,559	-		MIT1002_03497	0.78	-0.3
3,908,634	-		MIT1002_03497	0.85	+0.8
3,908,635	-		MIT1002_03497	0.86	-1.1
3,908,645	-		MIT1002_03497	0.87	-0.1
3,908,648	-		MIT1002_03497	0.87	-0.0
3,908,685	+				-2.0
3,908,700	-				+0.1
3,908,726	-				+0.0
3,908,800	-				+1.6
3,908,800	-				-0.8
3,908,840	+				-0.9
3,909,071	-		MIT1002_03498	0.14	+0.9
3,909,091	-		MIT1002_03498	0.18	+0.7
3,909,101	+		MIT1002_03498	0.19	-1.8
3,909,132	+		MIT1002_03498	0.24	+0.1
3,909,140	-		MIT1002_03498	0.25	-0.5
3,909,140	-		MIT1002_03498	0.25	+1.9
3,909,140	-		MIT1002_03498	0.25	-1.5
3,909,229	-		MIT1002_03498	0.40	-0.7
3,909,245	-		MIT1002_03498	0.42	+1.6
3,909,344	-		MIT1002_03498	0.58	+1.6
3,909,391	-		MIT1002_03498	0.66	+0.5
3,909,420	+		MIT1002_03498	0.70	+0.7
3,909,420	+		MIT1002_03498	0.70	-1.0
3,909,420	+		MIT1002_03498	0.70	+0.4
3,909,420	+		MIT1002_03498	0.70	+0.1
3,909,428	-		MIT1002_03498	0.72	-1.0
3,909,441	+		MIT1002_03498	0.74	-0.2
3,909,443	+		MIT1002_03498	0.74	-1.5
3,909,474	+		MIT1002_03498	0.79	+1.0
3,909,476	+		MIT1002_03498	0.79	-1.3
3,909,481	+		MIT1002_03498	0.80	-0.2
3,909,579	-				-0.8
3,909,591	-				-2.9
3,909,612	+				-0.8
3,909,620	-				+0.2
3,909,651	-				+0.1
3,909,750	+		MIT1002_03499	0.11	-2.3
3,909,778	-		MIT1002_03499	0.13	-0.8
3,909,945	-		MIT1002_03499	0.27	-2.8
3,909,945	-		MIT1002_03499	0.27	+0.6
3,910,095	+		MIT1002_03499	0.39	-0.6
3,910,258	-		MIT1002_03499	0.53	-0.5
3,910,274	+		MIT1002_03499	0.54	+0.5
3,910,282	-		MIT1002_03499	0.55	-0.1
3,910,474	+		MIT1002_03499	0.71	-0.8
3,910,489	+		MIT1002_03499	0.72	-0.7