Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03292

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,669,169	-		MIT1002_03291	0.84	+1.2
3,669,177	-		MIT1002_03291	0.84	-0.4
3,669,183	+		MIT1002_03291	0.84	-0.8
3,669,191	-		MIT1002_03291	0.84	-0.4
3,669,191	-		MIT1002_03291	0.84	+0.4
3,669,245	+		MIT1002_03291	0.87	+0.2
3,669,263	-		MIT1002_03291	0.87	+0.5
3,669,263	-		MIT1002_03291	0.87	-0.1
3,669,263	-		MIT1002_03291	0.87	-0.1
3,669,309	+		MIT1002_03291	0.89	+0.2
3,669,317	-		MIT1002_03291	0.89	-0.4
3,669,374	+				-0.6
3,669,374	+				+0.2
3,669,522	-				-0.1
3,669,561	-				-1.9
3,669,749	+				+0.5
3,669,779	-				-0.2
3,669,779	-				+0.0
3,669,803	+				+1.0
3,669,806	+				+0.0
3,669,811	-				-1.0
3,669,819	-				-1.1
3,669,819	-				+0.4
3,669,819	-				+0.8
3,669,825	+				+0.9
3,669,852	-				-0.4
3,669,945	-				+0.1
3,669,945	-				+0.2
3,669,970	+				-0.5
3,669,977	+				-0.1
3,669,983	-				-1.2
3,670,073	+				+0.3
3,670,073	+				-2.3
3,670,217	-				+0.4
3,670,233	+				+0.5
3,670,573	+		MIT1002_03292	0.31	-0.1
3,670,583	+		MIT1002_03292	0.32	-0.9
3,670,583	+		MIT1002_03292	0.32	-0.6
3,670,583	+		MIT1002_03292	0.32	-2.4
3,670,583	+		MIT1002_03292	0.32	+1.1
3,670,591	-		MIT1002_03292	0.33	-0.9
3,670,628	+		MIT1002_03292	0.35	+1.1
3,670,628	+		MIT1002_03292	0.35	-1.2
3,670,628	+		MIT1002_03292	0.35	-0.0
3,670,628	+		MIT1002_03292	0.35	+0.7
3,670,628	+		MIT1002_03292	0.35	+1.6
3,670,628	+		MIT1002_03292	0.35	+3.2
3,670,628	+		MIT1002_03292	0.35	-0.0
3,670,628	+		MIT1002_03292	0.35	-0.3
3,670,628	+		MIT1002_03292	0.35	+0.3
3,670,628	+		MIT1002_03292	0.35	-0.1
3,670,628	+		MIT1002_03292	0.35	+0.6
3,670,636	-		MIT1002_03292	0.35	-0.4
3,670,636	-		MIT1002_03292	0.35	-1.6
3,670,636	-		MIT1002_03292	0.35	-1.0
3,670,636	-		MIT1002_03292	0.35	-0.7
3,670,636	-		MIT1002_03292	0.35	-1.2
3,670,636	-		MIT1002_03292	0.35	-1.2
3,670,636	-		MIT1002_03292	0.35	+0.9
3,670,657	-		MIT1002_03292	0.37	+0.5
3,670,688	-		MIT1002_03292	0.39	+1.1
3,670,725	-		MIT1002_03292	0.41	+0.3
3,670,740	+		MIT1002_03292	0.42	-1.1
3,670,748	-		MIT1002_03292	0.43	-1.1
3,670,805	+		MIT1002_03292	0.46	+0.2
3,670,805	+		MIT1002_03292	0.46	-0.3
3,670,821	+		MIT1002_03292	0.47	-0.1
3,670,821	+		MIT1002_03292	0.47	+1.3
3,670,821	+		MIT1002_03292	0.47	+0.5
3,670,821	+		MIT1002_03292	0.47	-1.7
3,670,821	+		MIT1002_03292	0.47	-0.1
3,670,829	-		MIT1002_03292	0.48	-0.4
3,670,829	-		MIT1002_03292	0.48	-0.4
3,670,829	-		MIT1002_03292	0.48	-0.6
3,670,829	-		MIT1002_03292	0.48	-0.6
3,671,006	-		MIT1002_03292	0.59	-0.9
3,671,076	-		MIT1002_03292	0.64	+0.1
3,671,222	+		MIT1002_03292	0.73	-0.6
3,671,354	+		MIT1002_03292	0.82	-0.9
3,671,362	-		MIT1002_03292	0.82	-1.9
3,671,412	+		MIT1002_03292	0.85	+1.0
3,671,428	+		MIT1002_03292	0.86	-0.7
3,671,475	+		MIT1002_03292	0.89	-1.0
3,671,500	+				-0.5
3,671,500	+				+0.1
3,671,500	+				+0.7
3,671,507	+				-1.2
3,671,508	-				+0.6
3,671,508	-				+0.3
3,671,508	-				-0.9
3,671,611	+				-0.6
3,671,657	+				-0.9
3,671,665	-				+1.8
3,671,665	-				-0.2
3,671,684	+				+0.3
3,671,684	-				-0.1
3,671,696	+				-0.4
3,671,697	-				+0.4
3,671,698	-				+1.3
3,671,755	-				+0.4
3,671,951	-				+1.2
3,672,092	-				+0.3
3,672,202	+				-0.6
3,672,210	-				-1.1
3,672,220	-				+0.1
3,672,304	+		MIT1002_03293	0.10	+0.0
3,672,312	-		MIT1002_03293	0.10	+0.5
3,672,328	+		MIT1002_03293	0.11	-0.3
3,672,328	+		MIT1002_03293	0.11	-0.3
3,672,374	+		MIT1002_03293	0.13	+1.8
3,672,374	+		MIT1002_03293	0.13	-0.9
3,672,374	+		MIT1002_03293	0.13	+0.5
3,672,374	+		MIT1002_03293	0.13	-0.2
3,672,374	+		MIT1002_03293	0.13	-1.0
3,672,382	-		MIT1002_03293	0.13	-3.0
3,672,382	-		MIT1002_03293	0.13	-0.2
3,672,463	+		MIT1002_03293	0.16	-2.0
3,672,479	+		MIT1002_03293	0.16	+0.5
3,672,479	+		MIT1002_03293	0.16	-0.7
3,672,479	+		MIT1002_03293	0.16	+0.2
3,672,479	+		MIT1002_03293	0.16	+0.4
3,672,487	-		MIT1002_03293	0.16	+0.7
3,672,516	-		MIT1002_03293	0.17	-0.1
3,672,523	-		MIT1002_03293	0.18	+3.3
3,672,562	-		MIT1002_03293	0.19	-1.0
3,672,562	-		MIT1002_03293	0.19	-0.4
3,672,569	+		MIT1002_03293	0.19	+1.4
3,672,577	-		MIT1002_03293	0.20	-0.9
3,672,577	-		MIT1002_03293	0.20	-0.9