Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03280

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,653,963	+		MIT1002_03279	0.63	-1.9
3,653,963	+		MIT1002_03279	0.63	-0.3
3,653,964	+		MIT1002_03279	0.63	-1.0
3,653,972	-		MIT1002_03279	0.64	-0.4
3,654,001	+		MIT1002_03279	0.65	-0.8
3,654,009	-		MIT1002_03279	0.66	-0.6
3,654,017	-		MIT1002_03279	0.66	-1.7
3,654,151	-		MIT1002_03279	0.74	-0.2
3,654,151	-		MIT1002_03279	0.74	-1.5
3,654,151	-		MIT1002_03279	0.74	-0.9
3,654,163	-		MIT1002_03279	0.74	+0.4
3,654,204	-		MIT1002_03279	0.77	-2.0
3,654,210	+		MIT1002_03279	0.77	-0.6
3,654,237	+		MIT1002_03279	0.78	-1.5
3,654,237	+		MIT1002_03279	0.78	+1.7
3,654,259	-		MIT1002_03279	0.80	-1.5
3,654,282	+		MIT1002_03279	0.81	+0.0
3,654,378	+		MIT1002_03279	0.86	+1.0
3,654,378	+		MIT1002_03279	0.86	-1.6
3,654,408	-		MIT1002_03279	0.88	+0.6
3,654,503	+				-1.9
3,654,503	+				-0.5
3,654,549	+				-0.3
3,654,577	-				-1.2
3,654,579	+				-0.1
3,654,582	-				-0.8
3,654,658	+				-1.1
3,654,658	+				+0.2
3,654,666	-				-0.8
3,654,677	+				+1.2
3,654,685	-				+0.4
3,654,687	+				+0.6
3,654,707	-				-1.1
3,654,744	-				-3.6
3,654,827	+				+1.3
3,654,893	+				+0.4
3,654,896	-				-0.1
3,654,900	+				+0.4
3,654,936	-				+0.2
3,654,998	+				+0.2
3,655,002	+				+0.1
3,655,065	+		MIT1002_03280	0.17	+1.1
3,655,232	+		MIT1002_03280	0.35	+0.4
3,655,301	-		MIT1002_03280	0.43	-0.0
3,655,409	-		MIT1002_03280	0.55	+1.3
3,655,414	+		MIT1002_03280	0.55	+0.4
3,655,414	+		MIT1002_03280	0.55	+1.0
3,655,443	-		MIT1002_03280	0.59	-0.4
3,655,474	+		MIT1002_03280	0.62	+0.8
3,655,484	-		MIT1002_03280	0.63	-0.2
3,655,571	+		MIT1002_03280	0.73	-2.7
3,655,651	-		MIT1002_03280	0.82	+1.8
3,655,693	-		MIT1002_03280	0.86	+1.0
3,655,717	+		MIT1002_03280	0.89	+0.5
3,655,727	-				-2.8
3,655,769	+				+0.2
3,655,815	+				+0.8
3,655,820	-				+1.0
3,655,932	+				+0.3
3,655,950	-				+0.1
3,655,955	-				+0.3
3,655,986	+				-0.4
3,655,991	+				+1.3
3,656,032	-				+0.3
3,656,066	-				+0.5
3,656,087	+				+0.2
3,656,161	+		MIT1002_03281	0.12	-1.4
3,656,183	-		MIT1002_03281	0.14	+2.1
3,656,208	+		MIT1002_03281	0.15	-0.7
3,656,251	+		MIT1002_03281	0.19	+1.2
3,656,262	-		MIT1002_03281	0.19	+0.8
3,656,390	-		MIT1002_03281	0.29	-2.2
3,656,462	+		MIT1002_03281	0.34	+0.6
3,656,491	+		MIT1002_03281	0.36	-0.1
3,656,491	+		MIT1002_03281	0.36	-0.0
3,656,491	+		MIT1002_03281	0.36	+0.8
3,656,498	-		MIT1002_03281	0.37	+0.1
3,656,499	-		MIT1002_03281	0.37	-1.3
3,656,499	-		MIT1002_03281	0.37	+0.4
3,656,499	-		MIT1002_03281	0.37	-0.0
3,656,499	-		MIT1002_03281	0.37	+2.1
3,656,505	+		MIT1002_03281	0.37	-1.2
3,656,579	+		MIT1002_03281	0.43	+0.4
3,656,597	-		MIT1002_03281	0.44	+1.1
3,656,614	+		MIT1002_03281	0.45	+0.3
3,656,793	+		MIT1002_03281	0.59	-0.2
3,656,802	+		MIT1002_03281	0.59	-0.1