Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03047

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,397,760	-		MIT1002_03046	0.54	-0.9
3,397,828	-		MIT1002_03046	0.57	-0.8
3,397,828	-		MIT1002_03046	0.57	-1.9
3,397,923	+		MIT1002_03046	0.62	+0.7
3,398,064	-		MIT1002_03046	0.68	+1.0
3,398,064	-		MIT1002_03046	0.68	+0.3
3,398,065	+		MIT1002_03046	0.69	+1.1
3,398,065	+		MIT1002_03046	0.69	-0.2
3,398,073	-		MIT1002_03046	0.69	+1.2
3,398,073	-		MIT1002_03046	0.69	-0.3
3,398,073	-		MIT1002_03046	0.69	+0.6
3,398,073	-		MIT1002_03046	0.69	+0.6
3,398,091	+		MIT1002_03046	0.70	+0.0
3,398,091	+		MIT1002_03046	0.70	-2.8
3,398,091	+		MIT1002_03046	0.70	-1.0
3,398,099	-		MIT1002_03046	0.70	-0.5
3,398,174	-		MIT1002_03046	0.74	+0.8
3,398,225	+		MIT1002_03046	0.76	-1.9
3,398,233	-		MIT1002_03046	0.76	+0.5
3,398,302	-		MIT1002_03046	0.80	-0.1
3,398,387	+		MIT1002_03046	0.84	-0.5
3,398,387	+		MIT1002_03046	0.84	-0.3
3,398,394	-		MIT1002_03046	0.84	-0.8
3,398,405	-		MIT1002_03046	0.84	-0.2
3,398,422	+		MIT1002_03046	0.85	+0.2
3,398,511	-		MIT1002_03046	0.89	+0.1
3,398,513	+		MIT1002_03046	0.90	-0.4
3,398,521	-		MIT1002_03046	0.90	+0.2
3,398,549	+				+0.0
3,398,559	+				+0.3
3,398,612	+				+0.4
3,398,722	-				-0.7
3,398,744	-				-1.2
3,398,751	-				+1.2
3,398,759	-				+0.4
3,398,759	-				-0.1
3,398,774	-				-0.7
3,398,782	-				-2.4
3,398,813	+		MIT1002_03047	0.19	-0.4
3,398,832	+		MIT1002_03047	0.25	-2.8
3,398,851	+		MIT1002_03047	0.31	+0.0
3,398,851	+		MIT1002_03047	0.31	+0.0
3,398,851	+		MIT1002_03047	0.31	-1.4
3,398,859	-		MIT1002_03047	0.33	-0.4
3,398,859	-		MIT1002_03047	0.33	-0.5
3,398,897	-		MIT1002_03047	0.45	+0.1
3,398,897	-		MIT1002_03047	0.45	-2.8
3,398,979	-		MIT1002_03047	0.71	-0.7
3,399,000	-		MIT1002_03047	0.77	-1.8
3,399,000	-		MIT1002_03047	0.77	+0.4
3,399,028	+		MIT1002_03047	0.86	-0.2
3,399,081	+				-0.1
3,399,084	+				-1.2
3,399,112	+				+1.2
3,399,122	+				+0.3
3,399,170	-				-0.6
3,399,208	+				+1.3
3,399,329	+		MIT1002_03048	0.12	-0.4
3,399,347	+		MIT1002_03048	0.13	+1.1
3,399,355	-		MIT1002_03048	0.14	-0.1
3,399,371	+		MIT1002_03048	0.15	-1.0
3,399,372	+		MIT1002_03048	0.15	+1.2
3,399,468	+		MIT1002_03048	0.22	+0.8
3,399,819	+		MIT1002_03048	0.48	-0.4
3,399,827	-		MIT1002_03048	0.49	+0.1
3,399,827	-		MIT1002_03048	0.49	+0.4
3,399,829	+		MIT1002_03048	0.49	+0.7
3,399,829	+		MIT1002_03048	0.49	-0.1
3,399,837	-		MIT1002_03048	0.49	+0.9
3,399,849	+		MIT1002_03048	0.50	-0.3
3,399,849	+		MIT1002_03048	0.50	+0.0
3,399,938	-		MIT1002_03048	0.57	-0.2
3,399,954	-		MIT1002_03048	0.58	-0.2
3,399,979	-		MIT1002_03048	0.60	-0.7
3,400,070	-		MIT1002_03048	0.66	+0.2
3,400,070	-		MIT1002_03048	0.66	+0.2