Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02908

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,230,641	+		MIT1002_02907	0.84	+1.4
3,230,667	-		MIT1002_02907	0.88	+0.2
3,230,849	+				+1.1
3,230,849	+				-0.5
3,230,849	+				+2.1
3,230,857	-				-1.2
3,230,861	+				-0.4
3,230,928	+				-2.3
3,230,936	-				+1.4
3,231,216	-				+0.4
3,231,284	-				-0.7
3,231,495	-				-0.7
3,231,529	+				+0.1
3,231,551	+				-0.6
3,231,694	+		MIT1002_02908	0.16	-0.1
3,231,741	+		MIT1002_02908	0.19	-0.6
3,231,793	+		MIT1002_02908	0.23	-1.1
3,231,801	-		MIT1002_02908	0.24	-0.1
3,231,812	-		MIT1002_02908	0.24	+2.8
3,231,836	+		MIT1002_02908	0.26	-2.2
3,231,904	+		MIT1002_02908	0.31	-0.7
3,231,904	+		MIT1002_02908	0.31	-1.9
3,231,904	+		MIT1002_02908	0.31	-0.1
3,231,912	-		MIT1002_02908	0.31	-1.2
3,231,912	-		MIT1002_02908	0.31	-1.3
3,231,945	+		MIT1002_02908	0.33	-0.9
3,232,010	-		MIT1002_02908	0.38	-1.3
3,232,079	-		MIT1002_02908	0.43	-0.9
3,232,143	-		MIT1002_02908	0.47	+0.0
3,232,271	-		MIT1002_02908	0.56	-0.6
3,232,311	+		MIT1002_02908	0.58	-1.8
3,232,593	-		MIT1002_02908	0.78	-1.7
3,232,619	+		MIT1002_02908	0.79	-0.2
3,232,625	-		MIT1002_02908	0.80	+0.6
3,232,658	+		MIT1002_02908	0.82	-1.2
3,232,685	-		MIT1002_02908	0.84	-1.1
3,232,708	-		MIT1002_02908	0.85	-0.5
3,232,713	+		MIT1002_02908	0.86	+1.1
3,232,812	+				+1.5
3,232,820	-				+0.4
3,232,861	+				+0.8
3,232,863	+				-0.3
3,232,915	+				+0.3
3,232,937	+				-1.3
3,233,035	+				-0.5
3,233,089	+				+0.1
3,233,089	+				+0.0
3,233,096	-				+0.8
3,233,097	-				-1.2
3,233,097	-				+0.2
3,233,162	+		MIT1002_02909	0.13	-1.3
3,233,165	-		MIT1002_02909	0.14	+0.2
3,233,181	+		MIT1002_02909	0.15	-2.1
3,233,186	+		MIT1002_02909	0.15	-0.5
3,233,194	-		MIT1002_02909	0.15	-2.5
3,233,194	-		MIT1002_02909	0.15	+0.8
3,233,194	-		MIT1002_02909	0.15	+0.3
3,233,268	+		MIT1002_02909	0.20	+0.6
3,233,276	-		MIT1002_02909	0.20	+0.1
3,233,333	+		MIT1002_02909	0.24	+0.8
3,233,372	+		MIT1002_02909	0.26	-0.8
3,233,480	+		MIT1002_02909	0.33	-0.9
3,233,481	+		MIT1002_02909	0.33	-1.6
3,233,487	+		MIT1002_02909	0.33	-0.4
3,233,487	+		MIT1002_02909	0.33	+1.2
3,233,492	+		MIT1002_02909	0.33	-0.3
3,233,492	+		MIT1002_02909	0.33	-1.7
3,233,500	-		MIT1002_02909	0.34	+0.9
3,233,526	-		MIT1002_02909	0.35	-0.6
3,233,550	+		MIT1002_02909	0.37	-1.3
3,233,777	-		MIT1002_02909	0.51	-0.4
3,233,785	+		MIT1002_02909	0.51	-0.7
3,233,852	-		MIT1002_02909	0.55	-0.1
3,233,902	-		MIT1002_02909	0.58	-0.3
3,233,902	-		MIT1002_02909	0.58	+0.5