Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02839

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,147,286	-				+1.2
3,147,292	-				-0.5
3,147,295	+				+0.3
3,147,398	+				+0.5
3,147,398	+				+0.0
3,147,406	-				+0.1
3,147,506	-				+0.8
3,147,517	+		MIT1002_02838	0.12	-0.3
3,147,524	-		MIT1002_02838	0.13	+0.2
3,147,532	-		MIT1002_02838	0.14	-0.2
3,147,550	-		MIT1002_02838	0.17	+0.9
3,147,615	-		MIT1002_02838	0.29	-0.6
3,147,615	-		MIT1002_02838	0.29	-0.8
3,147,691	+		MIT1002_02838	0.42	-0.3
3,147,691	+		MIT1002_02838	0.42	+0.7
3,147,709	-		MIT1002_02838	0.45	+0.2
3,147,895	+		MIT1002_02838	0.78	+0.6
3,147,900	-		MIT1002_02838	0.79	-0.6
3,147,948	-		MIT1002_02838	0.87	-0.5
3,147,984	-				+1.5
3,147,986	+				+0.3
3,147,986	+				-0.2
3,147,994	-				-0.9
3,148,155	-				-1.5
3,148,202	+				-0.9
3,148,203	-				-1.1
3,148,236	+				+0.7
3,148,409	+		MIT1002_02839	0.10	+0.6
3,148,415	-		MIT1002_02839	0.10	-0.9
3,148,444	+		MIT1002_02839	0.12	-0.1
3,148,484	-		MIT1002_02839	0.15	+1.1
3,148,494	-		MIT1002_02839	0.15	+0.5
3,148,520	-		MIT1002_02839	0.17	+0.6
3,148,589	+		MIT1002_02839	0.21	+0.1
3,148,686	+		MIT1002_02839	0.27	+1.3
3,148,696	-		MIT1002_02839	0.28	-0.1
3,148,704	+		MIT1002_02839	0.28	-0.5
3,148,712	-		MIT1002_02839	0.29	+1.5
3,148,712	-		MIT1002_02839	0.29	-0.2
3,148,712	-		MIT1002_02839	0.29	+2.0
3,148,815	-		MIT1002_02839	0.35	-0.4
3,148,836	-		MIT1002_02839	0.36	+0.4
3,148,936	+		MIT1002_02839	0.42	+0.7
3,148,996	+		MIT1002_02839	0.46	-0.8
3,149,004	-		MIT1002_02839	0.46	-0.3
3,149,039	+		MIT1002_02839	0.49	-1.6
3,149,099	+		MIT1002_02839	0.52	+0.2
3,149,105	-		MIT1002_02839	0.53	-0.2
3,149,106	-		MIT1002_02839	0.53	-3.2
3,149,116	+		MIT1002_02839	0.53	-0.7
3,149,124	-		MIT1002_02839	0.54	-2.0
3,149,176	-		MIT1002_02839	0.57	+0.6
3,149,194	+		MIT1002_02839	0.58	-1.8
3,149,197	+		MIT1002_02839	0.58	-0.1
3,149,214	-		MIT1002_02839	0.59	+1.3
3,149,270	+		MIT1002_02839	0.63	+0.1
3,149,275	+		MIT1002_02839	0.63	-0.3
3,149,283	-		MIT1002_02839	0.64	+0.5
3,149,293	+		MIT1002_02839	0.64	-0.6
3,149,298	+		MIT1002_02839	0.64	-0.3
3,149,316	+		MIT1002_02839	0.66	-0.1
3,149,317	-		MIT1002_02839	0.66	+0.4
3,149,322	+		MIT1002_02839	0.66	+0.0
3,149,322	+		MIT1002_02839	0.66	+0.4
3,149,330	-		MIT1002_02839	0.66	-2.1
3,149,354	-		MIT1002_02839	0.68	-0.9
3,149,395	+		MIT1002_02839	0.70	-0.9
3,149,419	+		MIT1002_02839	0.72	-0.2
3,149,439	+		MIT1002_02839	0.73	-0.2
3,149,447	-		MIT1002_02839	0.74	+2.0
3,149,490	+		MIT1002_02839	0.76	+0.8
3,149,508	-		MIT1002_02839	0.77	+0.4
3,149,514	+		MIT1002_02839	0.78	-0.7
3,149,596	+		MIT1002_02839	0.83	+0.5
3,149,605	-		MIT1002_02839	0.83	+0.6
3,149,643	+		MIT1002_02839	0.86	+0.9
3,149,686	-		MIT1002_02839	0.88	-1.8
3,149,698	-		MIT1002_02839	0.89	+1.2
3,149,729	-				+0.1
3,149,731	+				-0.7
3,149,742	-				-1.2
3,149,742	-				-0.8
3,149,864	-				+1.3
3,149,924	+				+0.1
3,150,092	-		MIT1002_02840	0.28	-2.9
3,150,101	+		MIT1002_02840	0.29	+0.5
3,150,109	-		MIT1002_02840	0.30	+0.1
3,150,116	+		MIT1002_02840	0.31	+1.6
3,150,119	+		MIT1002_02840	0.31	-1.1
3,150,136	+		MIT1002_02840	0.33	+1.1
3,150,394	+		MIT1002_02840	0.66	+0.2
3,150,512	+		MIT1002_02840	0.81	+0.9
3,150,512	+		MIT1002_02840	0.81	+0.3
3,150,512	+		MIT1002_02840	0.81	+1.3
3,150,512	+		MIT1002_02840	0.81	-1.5
3,150,517	+		MIT1002_02840	0.82	+0.1
3,150,615	-				-0.5
3,150,633	+				-0.7
3,150,703	-				-0.5
3,150,708	+				+0.4
3,150,734	+				+0.5
3,150,742	-				-1.7
3,150,772	-		MIT1002_02841	0.10	-0.3
3,150,869	+		MIT1002_02841	0.23	-0.1
3,150,871	+		MIT1002_02841	0.23	-1.8
3,150,871	+		MIT1002_02841	0.23	+0.3
3,150,871	+		MIT1002_02841	0.23	-0.1
3,150,871	+		MIT1002_02841	0.23	-1.0
3,150,871	+		MIT1002_02841	0.23	-0.7