Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02771

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,070,432	+				-0.2
3,071,379	+				-2.0
3,071,397	+				+0.5
3,071,412	+				-0.0
3,071,415	-				-0.4
3,071,449	+				+1.3
3,071,480	+				-0.1
3,071,491	+		MIT1002_02771	0.10	-0.8
3,071,491	+		MIT1002_02771	0.10	-1.6
3,071,538	+		MIT1002_02771	0.18	-2.5
3,071,671	+		MIT1002_02771	0.41	+0.8
3,071,728	+		MIT1002_02771	0.51	-0.4
3,071,746	-		MIT1002_02771	0.54	+1.5
3,071,823	-		MIT1002_02771	0.68	-3.5
3,071,946	-		MIT1002_02771	0.89	+0.1
3,071,971	+				-0.3
3,071,980	-				+0.8
3,072,038	+				-1.3
3,072,046	-				-0.4
3,072,085	+				-0.1
3,072,085	+				+0.3
3,072,093	-				-0.3
3,072,093	-				-1.8
3,072,093	-				-2.9
3,072,094	-				+1.0
3,072,103	+				-0.6
3,072,111	-				-0.8
3,072,291	+				+0.8
3,072,347	+		MIT1002_02772	0.14	-0.1
3,072,363	+		MIT1002_02772	0.16	+2.5
3,072,371	-		MIT1002_02772	0.17	-1.0
3,072,428	-		MIT1002_02772	0.25	-0.7
3,072,490	+		MIT1002_02772	0.34	-0.8
3,072,535	+		MIT1002_02772	0.40	-0.5
3,072,539	-		MIT1002_02772	0.40	+0.1
3,072,558	+		MIT1002_02772	0.43	-1.3
3,072,629	-		MIT1002_02772	0.53	+0.4
3,072,715	+		MIT1002_02772	0.65	+1.0
3,072,715	+		MIT1002_02772	0.65	+0.7
3,072,715	+		MIT1002_02772	0.65	-0.3
3,072,715	+		MIT1002_02772	0.65	+0.5
3,072,723	-		MIT1002_02772	0.66	-0.2
3,072,723	-		MIT1002_02772	0.66	-2.7
3,072,729	-		MIT1002_02772	0.67	-0.1
3,072,806	+		MIT1002_02772	0.78	-1.0
3,072,816	+		MIT1002_02772	0.79	+1.8
3,072,824	-		MIT1002_02772	0.80	+0.8
3,072,824	-		MIT1002_02772	0.80	-2.5
3,072,826	+		MIT1002_02772	0.80	-0.7
3,072,836	-		MIT1002_02772	0.82	+0.2
3,072,986	-				-1.0