Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02705

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
3,005,635	-		MIT1002_02704	0.57	-1.5
3,005,762	+		MIT1002_02704	0.65	+3.4
3,005,779	-		MIT1002_02704	0.66	-1.2
3,005,807	+		MIT1002_02704	0.67	-0.1
3,005,823	+		MIT1002_02704	0.68	+0.6
3,005,912	+		MIT1002_02704	0.74	+0.3
3,005,962	+		MIT1002_02704	0.77	-0.1
3,006,028	+		MIT1002_02704	0.81	+0.6
3,006,028	+		MIT1002_02704	0.81	-1.4
3,006,036	+		MIT1002_02704	0.81	-1.1
3,006,036	-		MIT1002_02704	0.81	+0.2
3,006,036	-		MIT1002_02704	0.81	-0.3
3,006,036	-		MIT1002_02704	0.81	-1.0
3,006,036	-		MIT1002_02704	0.81	+0.0
3,006,044	-		MIT1002_02704	0.82	+0.1
3,006,055	+		MIT1002_02704	0.82	+0.6
3,006,055	+		MIT1002_02704	0.82	-1.5
3,006,063	-		MIT1002_02704	0.83	+0.8
3,006,063	-		MIT1002_02704	0.83	-0.5
3,006,117	+		MIT1002_02704	0.86	-0.2
3,006,167	-		MIT1002_02704	0.89	-1.3
3,006,219	-				-0.0
3,006,221	-				+0.1
3,006,232	+				-1.5
3,006,310	-				-0.7
3,006,390	+				-0.1
3,006,390	+				-0.1
3,006,398	-				+0.5
3,006,480	+				+0.8
3,006,493	-				+0.0
3,006,493	-				+0.8
3,006,591	+				-2.2
3,006,602	-				+0.2
3,006,698	-		MIT1002_02705	0.16	+0.4
3,006,705	-		MIT1002_02705	0.18	+0.7
3,006,710	-		MIT1002_02705	0.19	+0.7
3,006,739	-		MIT1002_02705	0.26	+0.5
3,006,773	+		MIT1002_02705	0.35	+0.4
3,006,775	-		MIT1002_02705	0.35	+1.1
3,006,777	-		MIT1002_02705	0.36	+1.8
3,006,787	-		MIT1002_02705	0.38	-0.8
3,006,787	-		MIT1002_02705	0.38	+0.4
3,006,804	-		MIT1002_02705	0.42	-0.1
3,006,829	-		MIT1002_02705	0.48	+0.5
3,006,836	+		MIT1002_02705	0.50	+0.5
3,006,867	-		MIT1002_02705	0.58	-0.7
3,006,892	+		MIT1002_02705	0.64	-2.5
3,006,923	+		MIT1002_02705	0.71	+0.4
3,006,967	-		MIT1002_02705	0.82	+0.5
3,007,150	+				+0.3
3,007,168	+				+0.4
3,007,168	-				-2.3
3,007,173	+				+0.5
3,007,203	-				+0.3
3,007,267	-				-1.3
3,007,290	-		MIT1002_02706	0.10	-0.1
3,007,292	+		MIT1002_02706	0.11	+0.5
3,007,328	-		MIT1002_02706	0.13	+0.2
3,007,397	+		MIT1002_02706	0.18	+0.0
3,007,402	+		MIT1002_02706	0.19	+0.7
3,007,402	+		MIT1002_02706	0.19	+0.8
3,007,405	-		MIT1002_02706	0.19	-0.9
3,007,407	+		MIT1002_02706	0.19	+1.2
3,007,423	+		MIT1002_02706	0.20	+1.7
3,007,431	-		MIT1002_02706	0.21	-0.5
3,007,431	-		MIT1002_02706	0.21	-2.0
3,007,431	-		MIT1002_02706	0.21	-0.7
3,007,431	-		MIT1002_02706	0.21	+1.1
3,007,461	+		MIT1002_02706	0.23	-0.7
3,007,556	-		MIT1002_02706	0.30	+1.1
3,007,594	+		MIT1002_02706	0.33	-0.1
3,007,627	+		MIT1002_02706	0.35	+0.7
3,007,627	+		MIT1002_02706	0.35	+1.0
3,007,729	+		MIT1002_02706	0.42	-0.3
3,007,801	+		MIT1002_02706	0.48	-0.4
3,007,801	+		MIT1002_02706	0.48	+0.8
3,007,949	+		MIT1002_02706	0.59	+1.0
3,007,959	+		MIT1002_02706	0.59	-0.8
3,007,967	-		MIT1002_02706	0.60	-0.4
3,008,007	+		MIT1002_02706	0.63	-1.4
3,008,026	+		MIT1002_02706	0.64	-0.7
3,008,027	+		MIT1002_02706	0.64	+0.0