Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02337

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
2,603,196	-				+0.1
2,603,203	+				+0.3
2,603,235	+				-1.3
2,603,283	+				-1.0
2,603,283	+				+0.2
2,603,283	+				-0.8
2,603,301	-				-1.9
2,603,301	-				+0.6
2,603,508	+		MIT1002_02336	0.30	-0.5
2,603,508	+		MIT1002_02336	0.30	+0.7
2,603,508	+		MIT1002_02336	0.30	-0.2
2,603,515	-		MIT1002_02336	0.31	-0.6
2,603,516	-		MIT1002_02336	0.31	+0.8
2,603,516	-		MIT1002_02336	0.31	+0.7
2,603,526	+		MIT1002_02336	0.33	-0.4
2,603,550	+		MIT1002_02336	0.36	-0.6
2,603,579	+		MIT1002_02336	0.40	-0.3
2,603,656	+		MIT1002_02336	0.50	+1.5
2,603,664	-		MIT1002_02336	0.51	+0.2
2,603,664	-		MIT1002_02336	0.51	-0.3
2,603,671	+		MIT1002_02336	0.52	-0.5
2,603,672	-		MIT1002_02336	0.52	-2.9
2,603,737	-		MIT1002_02336	0.61	-1.0
2,603,805	+		MIT1002_02336	0.70	-0.6
2,603,814	-		MIT1002_02336	0.71	-1.8
2,603,887	+		MIT1002_02336	0.80	-0.2
2,603,895	-		MIT1002_02336	0.81	-1.5
2,603,895	-		MIT1002_02336	0.81	+0.7
2,603,921	+		MIT1002_02336	0.85	-0.3
2,603,938	-		MIT1002_02336	0.87	-0.9
2,603,971	-				-0.5
2,603,976	+				+0.8
2,604,201	-				+1.1
2,604,267	-				-0.9
2,604,267	-				+0.3
2,604,310	-		MIT1002_02337	0.13	-0.9
2,604,407	+		MIT1002_02337	0.24	+0.2
2,604,409	+		MIT1002_02337	0.24	-0.1
2,604,417	+		MIT1002_02337	0.25	+0.9
2,604,444	+		MIT1002_02337	0.28	-1.0
2,604,535	+		MIT1002_02337	0.38	+0.1
2,604,540	+		MIT1002_02337	0.39	-0.3
2,604,543	-		MIT1002_02337	0.39	-0.2
2,604,564	-		MIT1002_02337	0.42	+0.6
2,604,593	+		MIT1002_02337	0.45	-0.5
2,604,729	-		MIT1002_02337	0.60	-0.4
2,604,729	-		MIT1002_02337	0.60	-1.8
2,604,743	+		MIT1002_02337	0.62	-1.1
2,604,768	+		MIT1002_02337	0.65	-0.1
2,604,769	-		MIT1002_02337	0.65	-0.7
2,604,776	-		MIT1002_02337	0.65	-0.4
2,604,776	-		MIT1002_02337	0.65	-1.0
2,604,893	+		MIT1002_02337	0.79	+0.1
2,604,893	+		MIT1002_02337	0.79	-0.0
2,604,893	+		MIT1002_02337	0.79	+0.2
2,604,973	+		MIT1002_02337	0.87	-1.6
2,604,973	+		MIT1002_02337	0.87	-2.3
2,605,009	+				+0.4
2,605,009	+				+0.2
2,605,010	+				-0.2
2,605,095	-				-1.0
2,605,095	-				+0.6
2,605,127	+				+0.1
2,605,141	-				-0.3
2,605,188	-				+0.7
2,605,220	-				-0.5
2,605,354	+		MIT1002_02338	0.32	+0.5
2,605,360	+		MIT1002_02338	0.34	-1.8
2,605,368	-		MIT1002_02338	0.37	-1.3
2,605,408	-		MIT1002_02338	0.50	+0.0
2,605,452	+		MIT1002_02338	0.65	-2.6
2,605,491	+		MIT1002_02338	0.78	-1.6
2,605,504	-		MIT1002_02338	0.82	-1.1
2,605,528	-				+0.1
2,605,528	-				-0.8
2,605,530	+				-2.1
2,605,538	-				-2.3
2,605,728	+		MIT1002_02339	0.72	-0.4
2,605,728	+		MIT1002_02339	0.72	-0.3
2,605,728	+		MIT1002_02339	0.72	+1.7
2,605,728	+		MIT1002_02339	0.72	-0.2
2,605,728	+		MIT1002_02339	0.72	-1.7
2,605,736	-		MIT1002_02339	0.75	-0.5
2,605,736	-		MIT1002_02339	0.75	-1.9
2,605,736	-		MIT1002_02339	0.75	-1.4
2,605,736	-		MIT1002_02339	0.75	-2.6
2,605,738	+		MIT1002_02339	0.76	-0.7
2,605,738	+		MIT1002_02339	0.76	-0.9
2,605,738	+		MIT1002_02339	0.76	+0.5
2,605,870	+				-0.2
2,605,879	-				+0.2
2,605,880	+				-0.4
2,605,880	+				+1.3
2,605,882	+				-0.3
2,605,888	-				+0.4
2,605,929	+				-0.5
2,605,947	+				+1.2
2,605,991	-		MIT1002_02340	0.15	-0.3
2,606,033	-		MIT1002_02340	0.21	+0.5
2,606,043	-		MIT1002_02340	0.23	+0.9
2,606,075	+		MIT1002_02340	0.28	+1.3
2,606,083	-		MIT1002_02340	0.29	+0.2
2,606,083	-		MIT1002_02340	0.29	+0.5