Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00915

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
1,012,499	-		MIT1002_00914	0.29	-1.7
1,012,522	+		MIT1002_00914	0.32	-1.4
1,012,552	+		MIT1002_00914	0.35	+0.2
1,012,560	-		MIT1002_00914	0.36	+0.4
1,012,662	+		MIT1002_00914	0.47	-1.1
1,012,801	+		MIT1002_00914	0.62	+0.2
1,012,824	-		MIT1002_00914	0.64	+1.9
1,012,853	-		MIT1002_00914	0.67	+0.2
1,012,856	+		MIT1002_00914	0.68	+0.6
1,012,876	-		MIT1002_00914	0.70	-0.4
1,013,002	+		MIT1002_00914	0.83	+0.4
1,013,034	+		MIT1002_00914	0.87	+0.4
1,013,066	+				+1.5
1,013,112	-				+0.4
1,013,202	+				+0.4
1,013,242	+				+0.2
1,013,277	-				-1.8
1,013,293	+				-0.2
1,013,320	+				+0.1
1,013,341	+				+0.1
1,013,344	-				-1.3
1,013,349	-				+1.2
1,013,349	-				+0.1
1,013,398	-				+0.5
1,013,417	+				+0.5
1,013,461	+				+1.0
1,013,468	+				+1.2
1,013,468	+				-0.6
1,013,478	+				+0.7
1,013,741	+		MIT1002_00915	0.24	-1.4
1,013,741	+		MIT1002_00915	0.24	+1.3
1,013,765	+		MIT1002_00915	0.27	-1.3
1,013,768	-		MIT1002_00915	0.27	-0.7
1,013,773	-		MIT1002_00915	0.27	+0.5
1,013,788	-		MIT1002_00915	0.29	-0.5
1,013,835	+		MIT1002_00915	0.33	-1.3
1,013,844	-		MIT1002_00915	0.34	+0.7
1,013,925	+		MIT1002_00915	0.41	-0.3
1,013,925	+		MIT1002_00915	0.41	+0.6
1,013,925	+		MIT1002_00915	0.41	-0.9
1,013,933	-		MIT1002_00915	0.42	+0.0
1,013,933	-		MIT1002_00915	0.42	+0.8
1,013,933	-		MIT1002_00915	0.42	+1.3
1,013,972	-		MIT1002_00915	0.45	-0.6
1,014,031	-		MIT1002_00915	0.51	-0.3
1,014,160	+		MIT1002_00915	0.62	-0.2
1,014,198	+		MIT1002_00915	0.66	-1.8
1,014,199	+		MIT1002_00915	0.66	-0.2
1,014,199	+		MIT1002_00915	0.66	-0.5
1,014,199	+		MIT1002_00915	0.66	-0.1
1,014,207	-		MIT1002_00915	0.67	-2.1
1,014,207	-		MIT1002_00915	0.67	-1.0
1,014,207	-		MIT1002_00915	0.67	-0.1
1,014,207	-		MIT1002_00915	0.67	-0.5
1,014,228	+		MIT1002_00915	0.69	-0.5
1,014,228	-		MIT1002_00915	0.69	-1.3
1,014,257	+		MIT1002_00915	0.71	-0.1
1,014,265	-		MIT1002_00915	0.72	-1.3
1,014,265	-		MIT1002_00915	0.72	-0.3
1,014,290	-		MIT1002_00915	0.74	-1.2
1,014,394	+		MIT1002_00915	0.84	+0.7
1,014,410	-		MIT1002_00915	0.85	+1.3
1,014,410	-		MIT1002_00915	0.85	+0.4
1,014,410	-		MIT1002_00915	0.85	+1.7
1,014,427	+		MIT1002_00915	0.87	-0.3
1,014,510	+				-0.5
1,014,518	-				+0.3
1,014,528	+				+1.1
1,014,570	+				+1.1
1,014,590	-				-1.0
1,014,621	-				+1.1
1,014,645	-				+1.4
1,014,646	+				-0.6
1,014,646	-				-0.8
1,014,656	+				+0.7
1,014,663	+				-2.1
1,014,663	+				-0.3
1,014,671	+				-0.2
1,014,744	+		MIT1002_00916	0.15	+0.8
1,014,762	+		MIT1002_00916	0.18	-1.3
1,014,866	-		MIT1002_00916	0.36	-2.4
1,014,987	-		MIT1002_00916	0.57	+0.6
1,014,993	+		MIT1002_00916	0.58	-2.3
1,015,032	-		MIT1002_00916	0.65	-0.5
1,015,034	+		MIT1002_00916	0.65	+0.7
1,015,166	-		MIT1002_00916	0.88	-0.9
1,015,220	-				+0.9
1,015,225	-				-0.1
1,015,349	+		MIT1002_00917	0.18	+1.2
1,015,392	-		MIT1002_00917	0.32	-0.0
1,015,440	-		MIT1002_00917	0.47	-1.1
1,015,538	+		MIT1002_00917	0.78	+0.8
1,015,573	+		MIT1002_00917	0.90	+0.1
1,015,573	+		MIT1002_00917	0.90	+1.2