Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MIT1002_00875 and MIT1002_00876 are separated by 15 nucleotides MIT1002_00876 and MIT1002_00877 are separated by 150 nucleotides MIT1002_00877 and MIT1002_00878 are separated by 340 nucleotides
MIT1002_00875: MIT1002_00875 - Phosphate transport system permease protein PstA, at 967,164 to 968,723
_00875
MIT1002_00876: MIT1002_00876 - Phosphate import ATP-binding protein PstB 3, at 968,739 to 969,545
_00876
MIT1002_00877: MIT1002_00877 - Repressor protein PhoU, at 969,696 to 970,412
_00877
MIT1002_00878: MIT1002_00878 - Sulfate permease CysP, at 970,753 to 972,024
_00878
Position (kb) 969
970
971 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 968.718 kb on + strand at 968.718 kb on + strand at 968.726 kb on - strand at 968.889 kb on + strand, within MIT1002_00876 at 968.925 kb on - strand, within MIT1002_00876 at 968.935 kb on - strand, within MIT1002_00876 at 969.076 kb on - strand, within MIT1002_00876 at 969.076 kb on - strand, within MIT1002_00876 at 969.120 kb on - strand, within MIT1002_00876 at 969.120 kb on - strand, within MIT1002_00876 at 969.121 kb on - strand, within MIT1002_00876 at 969.161 kb on + strand, within MIT1002_00876 at 969.177 kb on - strand, within MIT1002_00876 at 969.198 kb on + strand, within MIT1002_00876 at 969.243 kb on + strand, within MIT1002_00876 at 969.319 kb on - strand, within MIT1002_00876 at 969.328 kb on - strand, within MIT1002_00876 at 969.334 kb on - strand, within MIT1002_00876 at 969.421 kb on + strand, within MIT1002_00876 at 969.452 kb on + strand, within MIT1002_00876 at 969.521 kb on + strand at 969.551 kb on - strand at 969.605 kb on + strand at 969.665 kb on + strand at 969.708 kb on + strand at 969.708 kb on + strand at 969.776 kb on - strand, within MIT1002_00877 at 969.866 kb on - strand, within MIT1002_00877 at 969.961 kb on - strand, within MIT1002_00877 at 970.014 kb on - strand, within MIT1002_00877 at 970.112 kb on - strand, within MIT1002_00877 at 970.150 kb on - strand, within MIT1002_00877 at 970.150 kb on - strand, within MIT1002_00877 at 970.211 kb on + strand, within MIT1002_00877 at 970.211 kb on + strand, within MIT1002_00877 at 970.211 kb on + strand, within MIT1002_00877 at 970.211 kb on + strand, within MIT1002_00877 at 970.271 kb on + strand, within MIT1002_00877 at 970.288 kb on + strand, within MIT1002_00877 at 970.351 kb on + strand at 970.359 kb on - strand at 970.363 kb on + strand at 970.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 3 remove 968,718 + -3.0 968,718 + +0.7 968,726 - -2.2 968,889 + MIT1002_00876 0.19 -1.2 968,925 - MIT1002_00876 0.23 +0.1 968,935 - MIT1002_00876 0.24 -0.7 969,076 - MIT1002_00876 0.42 -2.9 969,076 - MIT1002_00876 0.42 -4.3 969,120 - MIT1002_00876 0.47 -1.5 969,120 - MIT1002_00876 0.47 -2.3 969,121 - MIT1002_00876 0.47 +0.2 969,161 + MIT1002_00876 0.52 -3.5 969,177 - MIT1002_00876 0.54 -0.3 969,198 + MIT1002_00876 0.57 -1.6 969,243 + MIT1002_00876 0.62 -0.9 969,319 - MIT1002_00876 0.72 -2.8 969,328 - MIT1002_00876 0.73 -2.0 969,334 - MIT1002_00876 0.74 +2.1 969,421 + MIT1002_00876 0.85 -1.5 969,452 + MIT1002_00876 0.88 +0.7 969,521 + +0.4 969,551 - +0.6 969,605 + -1.5 969,665 + +1.0 969,708 + -1.8 969,708 + -2.2 969,776 - MIT1002_00877 0.11 -3.1 969,866 - MIT1002_00877 0.24 -1.1 969,961 - MIT1002_00877 0.37 -2.3 970,014 - MIT1002_00877 0.44 -2.0 970,112 - MIT1002_00877 0.58 -0.0 970,150 - MIT1002_00877 0.63 -2.1 970,150 - MIT1002_00877 0.63 -3.6 970,211 + MIT1002_00877 0.72 -0.8 970,211 + MIT1002_00877 0.72 -0.8 970,211 + MIT1002_00877 0.72 -1.9 970,211 + MIT1002_00877 0.72 -1.3 970,271 + MIT1002_00877 0.80 -2.9 970,288 + MIT1002_00877 0.83 -3.3 970,351 + -1.4 970,359 - -1.3 970,363 + +0.2 970,371 - +0.7
Or see this region's nucleotide sequence