Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03194

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
3,556,916	-		MIT1002_03193	0.36	-2.8
3,556,970	-		MIT1002_03193	0.40	-1.0
3,556,975	-		MIT1002_03193	0.40	-0.1
3,556,976	+		MIT1002_03193	0.40	-0.8
3,556,981	+		MIT1002_03193	0.41	-2.3
3,556,991	+		MIT1002_03193	0.42	-1.4
3,557,018	+		MIT1002_03193	0.44	+0.8
3,557,018	+		MIT1002_03193	0.44	-1.1
3,557,026	-		MIT1002_03193	0.44	+0.4
3,557,041	+		MIT1002_03193	0.46	+0.4
3,557,047	-		MIT1002_03193	0.46	-0.3
3,557,132	-		MIT1002_03193	0.53	-0.8
3,557,133	-		MIT1002_03193	0.53	-1.5
3,557,203	-		MIT1002_03193	0.58	+0.1
3,557,326	+		MIT1002_03193	0.68	+0.3
3,557,383	+		MIT1002_03193	0.72	+0.3
3,557,384	+		MIT1002_03193	0.72	+0.3
3,557,392	-		MIT1002_03193	0.73	-0.1
3,557,410	-		MIT1002_03193	0.74	+0.2
3,557,415	-		MIT1002_03193	0.75	-0.2
3,557,420	-		MIT1002_03193	0.75	+0.2
3,557,431	+		MIT1002_03193	0.76	+0.8
3,557,573	+		MIT1002_03193	0.87	+0.0
3,557,609	+		MIT1002_03193	0.90	-0.3
3,557,635	+				+0.3
3,557,635	+				-1.1
3,557,643	-				+0.9
3,557,734	+				+1.9
3,557,757	+				+0.2
3,557,825	-				-1.1
3,557,837	+				+0.6
3,557,839	+				+1.2
3,557,890	+				+1.1
3,557,890	+				+0.2
3,557,903	-				-1.3
3,557,910	-				+0.1
3,557,929	-				-1.6
3,557,934	+				-1.0
3,557,973	-				+0.8
3,558,194	+		MIT1002_03194	0.15	-0.4
3,558,202	-		MIT1002_03194	0.15	-1.2
3,558,219	-		MIT1002_03194	0.16	-1.2
3,558,266	-		MIT1002_03194	0.18	+0.7
3,558,394	+		MIT1002_03194	0.22	+0.3
3,558,438	+		MIT1002_03194	0.24	-2.6
3,558,618	-		MIT1002_03194	0.31	-2.6
3,558,620	+		MIT1002_03194	0.31	+0.1
3,558,620	+		MIT1002_03194	0.31	-0.2
3,558,620	+		MIT1002_03194	0.31	-0.6
3,558,620	+		MIT1002_03194	0.31	-0.8
3,558,620	+		MIT1002_03194	0.31	-2.3
3,558,620	+		MIT1002_03194	0.31	-1.1
3,558,620	+		MIT1002_03194	0.31	+0.7
3,558,620	+		MIT1002_03194	0.31	-0.7
3,558,620	+		MIT1002_03194	0.31	+0.0
3,558,628	-		MIT1002_03194	0.31	-1.8
3,558,628	-		MIT1002_03194	0.31	+0.5
3,558,628	-		MIT1002_03194	0.31	-0.1
3,558,628	-		MIT1002_03194	0.31	+0.1
3,558,628	-		MIT1002_03194	0.31	-0.4
3,558,628	-		MIT1002_03194	0.31	+0.6
3,558,628	-		MIT1002_03194	0.31	+0.1
3,558,628	-		MIT1002_03194	0.31	-0.8
3,558,628	-		MIT1002_03194	0.31	-1.8
3,558,628	-		MIT1002_03194	0.31	-2.4
3,558,628	-		MIT1002_03194	0.31	-3.0
3,558,630	+		MIT1002_03194	0.31	+0.6
3,558,645	+		MIT1002_03194	0.32	-0.6
3,558,646	-		MIT1002_03194	0.32	+0.2
3,558,653	-		MIT1002_03194	0.32	-0.5
3,558,653	-		MIT1002_03194	0.32	+0.3
3,558,653	-		MIT1002_03194	0.32	-0.9
3,558,653	-		MIT1002_03194	0.32	+1.1
3,558,687	+		MIT1002_03194	0.33	+0.5
3,558,727	-		MIT1002_03194	0.35	-0.7
3,558,874	+		MIT1002_03194	0.40	-0.7
3,559,031	+		MIT1002_03194	0.46	+1.7
3,559,043	-		MIT1002_03194	0.47	+0.9
3,559,060	-		MIT1002_03194	0.47	+0.0
3,559,062	+		MIT1002_03194	0.47	+0.3
3,559,070	-		MIT1002_03194	0.48	+0.3
3,559,070	-		MIT1002_03194	0.48	-0.8
3,559,072	+		MIT1002_03194	0.48	-0.2
3,559,086	+		MIT1002_03194	0.48	-1.0
3,559,103	-		MIT1002_03194	0.49	-1.5
3,559,103	-		MIT1002_03194	0.49	-0.1
3,559,135	+		MIT1002_03194	0.50	-0.4
3,559,143	-		MIT1002_03194	0.50	+0.2
3,559,218	+		MIT1002_03194	0.53	+0.4
3,559,269	-		MIT1002_03194	0.55	-0.8
3,559,366	+		MIT1002_03194	0.59	-1.8
3,559,421	+		MIT1002_03194	0.61	+0.7
3,559,421	+		MIT1002_03194	0.61	-1.1
3,559,421	+		MIT1002_03194	0.61	-0.7
3,559,429	-		MIT1002_03194	0.61	+0.2
3,559,459	+		MIT1002_03194	0.62	-0.4
3,559,466	+		MIT1002_03194	0.62	-0.8
3,559,467	-		MIT1002_03194	0.62	+1.5
3,559,551	-		MIT1002_03194	0.66	-0.2
3,559,551	-		MIT1002_03194	0.66	+0.0
3,559,551	-		MIT1002_03194	0.66	+0.4
3,559,682	+		MIT1002_03194	0.70	-0.3
3,559,690	+		MIT1002_03194	0.71	+1.0
3,559,717	-		MIT1002_03194	0.72	-0.8
3,559,757	+		MIT1002_03194	0.73	-0.1
3,559,795	-		MIT1002_03194	0.75	-0.3
3,559,916	+		MIT1002_03194	0.79	-0.1
3,559,918	+		MIT1002_03194	0.79	+0.4
3,559,920	+		MIT1002_03194	0.79	-1.6
3,559,962	+		MIT1002_03194	0.81	-3.3
3,559,992	+		MIT1002_03194	0.82	-0.1
3,559,992	+		MIT1002_03194	0.82	+0.4
3,559,992	+		MIT1002_03194	0.82	+1.0
3,560,000	-		MIT1002_03194	0.82	+0.4
3,560,000	-		MIT1002_03194	0.82	+0.1
3,560,034	+		MIT1002_03194	0.84	+0.8
3,560,095	-		MIT1002_03194	0.86	-0.6
3,560,162	+		MIT1002_03194	0.88	-0.8
3,560,235	-				-3.0
3,560,262	-				-0.3
3,560,276	+				+0.6
3,560,284	-				-0.7
3,560,284	-				+0.4
3,560,284	-				-1.5
3,560,284	-				+0.1
3,560,284	-				-0.8
3,560,298	-				-0.4
3,560,391	-				+1.4
3,560,408	-				-0.4
3,560,460	+				+1.6
3,560,467	+				+0.0
3,560,467	+				+0.4
3,560,467	+				-1.8
3,560,475	-				+0.1
3,560,476	-				-1.8
3,560,515	+				-0.3
3,560,525	-				+0.7
3,560,533	+				-0.3
3,560,582	-				+0.6
3,560,582	-				-0.3