Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03116

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
3,469,696	-		MIT1002_03114	0.80	-1.3
3,469,710	+		MIT1002_03114	0.81	-1.3
3,469,711	+		MIT1002_03114	0.81	+0.0
3,469,751	-		MIT1002_03114	0.83	-2.0
3,469,792	+		MIT1002_03114	0.85	-1.5
3,469,995	+				+0.5
3,469,995	+				+0.0
3,470,110	+				+0.2
3,470,110	+				+0.2
3,470,110	+				-0.1
3,470,118	-				-1.3
3,470,118	-				+0.4
3,470,118	-				+0.0
3,470,120	+				-0.4
3,470,133	-				-2.2
3,470,162	+		MIT1002_03115	0.18	+1.1
3,470,163	-		MIT1002_03115	0.18	+1.0
3,470,197	-		MIT1002_03115	0.28	-0.7
3,470,213	+		MIT1002_03115	0.33	+0.1
3,470,231	+		MIT1002_03115	0.38	-0.1
3,470,284	+		MIT1002_03115	0.54	+1.6
3,470,292	-		MIT1002_03115	0.56	+0.7
3,470,292	-		MIT1002_03115	0.56	-1.2
3,470,292	-		MIT1002_03115	0.56	+1.3
3,470,333	-		MIT1002_03115	0.68	-0.2
3,470,333	-		MIT1002_03115	0.68	-2.0
3,470,448	+				+0.1
3,470,475	+				-1.8
3,470,494	-				-1.0
3,470,494	-				-0.2
3,470,582	-				+0.0
3,470,618	+				+0.1
3,470,681	-				-0.8
3,470,724	+				-1.1
3,470,757	-		MIT1002_03116	0.12	-1.8
3,470,800	-		MIT1002_03116	0.16	-1.3
3,470,811	+		MIT1002_03116	0.17	-2.7
3,470,862	-		MIT1002_03116	0.22	-0.8
3,470,897	-		MIT1002_03116	0.25	-1.3
3,470,941	+		MIT1002_03116	0.29	-2.0
3,470,959	-		MIT1002_03116	0.31	-1.8
3,471,004	-		MIT1002_03116	0.35	-2.1
3,471,183	+		MIT1002_03116	0.51	-0.9
3,471,183	+		MIT1002_03116	0.51	-3.7
3,471,193	+		MIT1002_03116	0.52	-2.1
3,471,266	-		MIT1002_03116	0.59	-1.5
3,471,345	+		MIT1002_03116	0.66	-2.6
3,471,353	-		MIT1002_03116	0.67	-3.3
3,471,427	-		MIT1002_03116	0.74	-1.1
3,471,438	+		MIT1002_03116	0.75	-1.5
3,471,438	+		MIT1002_03116	0.75	-0.8
3,471,438	+		MIT1002_03116	0.75	-3.3
3,471,439	-		MIT1002_03116	0.75	-1.0
3,471,476	-		MIT1002_03116	0.78	-2.0
3,471,504	+		MIT1002_03116	0.81	-1.5
3,471,525	-		MIT1002_03116	0.83	-5.6
3,471,584	+		MIT1002_03116	0.88	-2.3
3,471,617	+				-3.9
3,471,622	+				-2.3
3,471,704	+				+0.2
3,471,710	-				-1.0
3,471,778	+				-0.0
3,471,778	+				+0.5
3,471,786	-				+0.2
3,471,786	-				+0.6
3,471,826	+				+0.4
3,471,826	+				+0.6
3,471,826	+				-0.0
3,471,826	+				-0.4
3,471,826	+				+1.3
3,471,834	-				-1.0
3,471,834	-				+0.0
3,471,834	-				+0.8
3,471,900	-				+1.4
3,471,972	-		MIT1002_03117	0.14	+0.2
3,471,991	+		MIT1002_03117	0.17	+0.2
3,471,999	+		MIT1002_03117	0.18	+0.3
3,472,020	+		MIT1002_03117	0.22	+2.1
3,472,138	+		MIT1002_03117	0.41	+0.7
3,472,143	+		MIT1002_03117	0.42	-0.0
3,472,143	+		MIT1002_03117	0.42	+1.1
3,472,146	-		MIT1002_03117	0.43	+0.5
3,472,229	-		MIT1002_03117	0.57	+0.0
3,472,262	+		MIT1002_03117	0.62	-0.8
3,472,270	-		MIT1002_03117	0.63	-0.4
3,472,566	+				-2.5
3,472,566	+				-1.8
3,472,566	+				-1.1
3,472,567	-				-0.3
3,472,567	-				-0.5
3,472,567	-				-0.2
3,472,567	-				+0.6
3,472,567	-				+0.2
3,472,623	+		MIT1002_03118	0.19	+1.0
3,472,631	-		MIT1002_03118	0.21	-0.5