Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02993

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
3,330,150	+				+0.2
3,330,158	-				-2.8
3,330,174	+				+0.0
3,330,204	-				-0.3
3,330,303	+				-2.3
3,330,442	-				-4.2
3,330,442	-				-5.0
3,330,442	-				-1.6
3,330,444	+				-3.5
3,330,585	+				-4.7
3,330,643	+				-5.8
3,330,652	+				-2.9
3,330,713	-		MIT1002_02993	0.15	-1.3
3,330,812	+		MIT1002_02993	0.23	-4.6
3,330,812	+		MIT1002_02993	0.23	-3.9
3,330,820	-		MIT1002_02993	0.23	-4.4
3,330,820	-		MIT1002_02993	0.23	-1.6
3,330,937	+		MIT1002_02993	0.33	-3.9
3,331,028	-		MIT1002_02993	0.40	-5.9
3,331,036	-		MIT1002_02993	0.41	-4.5
3,331,132	+		MIT1002_02993	0.49	-6.0
3,331,140	-		MIT1002_02993	0.49	-4.1
3,331,174	-		MIT1002_02993	0.52	-4.8
3,331,175	-		MIT1002_02993	0.52	-2.6
3,331,409	-		MIT1002_02993	0.71	-6.5
3,331,488	+		MIT1002_02993	0.78	-5.1
3,331,510	-		MIT1002_02993	0.79	-4.4
3,331,577	-		MIT1002_02993	0.85	-3.2
3,331,606	-		MIT1002_02993	0.87	-4.7
3,331,627	+		MIT1002_02993	0.89	-5.2
3,331,634	+		MIT1002_02993	0.90	-2.0
3,331,648	+				-4.6
3,331,698	-				-4.7
3,331,848	+				-0.3
3,331,853	+				-1.9
3,331,853	+				-0.1
3,331,856	-				-0.6
3,331,861	-				-0.2
3,332,699	-				+0.1
3,332,720	-				+0.5