Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02832

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
3,138,617	+		MIT1002_02831	0.58	-5.0
3,138,617	+		MIT1002_02831	0.58	-3.5
3,138,625	-		MIT1002_02831	0.59	-3.9
3,138,625	-		MIT1002_02831	0.59	-3.9
3,138,625	-		MIT1002_02831	0.59	-4.3
3,138,625	-		MIT1002_02831	0.59	-1.9
3,138,669	+		MIT1002_02831	0.62	-5.3
3,138,669	+		MIT1002_02831	0.62	-5.6
3,138,669	+		MIT1002_02831	0.62	-4.4
3,138,669	+		MIT1002_02831	0.62	-4.8
3,138,677	-		MIT1002_02831	0.62	-4.5
3,138,684	+		MIT1002_02831	0.63	-5.3
3,138,687	-		MIT1002_02831	0.63	-4.7
3,138,692	-		MIT1002_02831	0.63	-4.5
3,138,692	-		MIT1002_02831	0.63	-6.8
3,138,715	+		MIT1002_02831	0.65	-3.8
3,138,746	+		MIT1002_02831	0.66	-4.8
3,138,773	+		MIT1002_02831	0.68	-1.4
3,138,781	-		MIT1002_02831	0.69	-2.7
3,138,781	-		MIT1002_02831	0.69	-5.6
3,138,781	-		MIT1002_02831	0.69	-2.2
3,138,918	+		MIT1002_02831	0.77	-8.4
3,138,997	-		MIT1002_02831	0.82	-4.3
3,139,015	+		MIT1002_02831	0.83	-5.4
3,139,051	+		MIT1002_02831	0.86	-5.4
3,139,058	+		MIT1002_02831	0.86	-3.3
3,139,059	-		MIT1002_02831	0.86	-4.8
3,139,123	+				-6.6
3,139,123	+				-3.5
3,139,149	+				-2.1
3,139,149	+				-6.4
3,139,149	+				-6.5
3,139,157	-				-4.9
3,139,157	-				-3.6
3,139,157	-				-2.2
3,139,157	-				-2.9
3,139,183	+				-5.4
3,139,183	+				-4.0
3,139,183	+				-3.7
3,139,183	+				-2.2
3,139,191	-				-4.4
3,139,191	-				-5.4
3,139,250	+				-3.2
3,139,250	+				-4.9
3,139,295	+				+0.5
3,139,311	+				-1.3
3,139,639	+				-3.9
3,139,654	+				-5.0
3,139,654	+				-2.1
3,139,662	-		MIT1002_02832	0.10	-2.7
3,139,673	+		MIT1002_02832	0.12	-3.0
3,139,740	-		MIT1002_02832	0.19	-4.3
3,139,740	-		MIT1002_02832	0.19	-3.9
3,139,750	-		MIT1002_02832	0.20	-3.5
3,139,770	+		MIT1002_02832	0.22	-5.5
3,139,788	+		MIT1002_02832	0.24	-3.6
3,139,807	+		MIT1002_02832	0.26	-5.7
3,139,807	+		MIT1002_02832	0.26	-4.7
3,139,815	-		MIT1002_02832	0.27	-4.5
3,139,815	-		MIT1002_02832	0.27	-2.4
3,139,815	-		MIT1002_02832	0.27	-5.2
3,139,882	-		MIT1002_02832	0.34	-1.1
3,139,936	+		MIT1002_02832	0.39	-3.2
3,139,991	+		MIT1002_02832	0.45	-5.6
3,139,991	+		MIT1002_02832	0.45	-2.4
3,140,183	-		MIT1002_02832	0.66	-3.6
3,140,229	-		MIT1002_02832	0.70	-1.7
3,140,281	+		MIT1002_02832	0.76	-3.9
3,140,367	-		MIT1002_02832	0.85	-3.5
3,140,374	+		MIT1002_02832	0.86	-4.9
3,140,375	-		MIT1002_02832	0.86	-3.8
3,140,427	+				-4.5
3,140,430	-				-5.5
3,140,448	+				-2.5
3,140,566	+				-5.9
3,140,567	-				-4.2
3,140,574	-				-4.1
3,140,639	-				-1.4
3,140,780	-				-7.8
3,140,873	+		MIT1002_02833	0.12	-3.4
3,140,934	+		MIT1002_02833	0.15	-2.7
3,141,025	+		MIT1002_02833	0.19	-5.1
3,141,038	-		MIT1002_02833	0.20	-4.1
3,141,038	-		MIT1002_02833	0.20	-2.7
3,141,175	+		MIT1002_02833	0.26	-4.9
3,141,178	-		MIT1002_02833	0.26	-3.9
3,141,207	+		MIT1002_02833	0.27	-6.2
3,141,281	+		MIT1002_02833	0.31	-7.2
3,141,290	-		MIT1002_02833	0.31	-3.6
3,141,346	-		MIT1002_02833	0.34	-6.2
3,141,358	-		MIT1002_02833	0.34	-5.6
3,141,393	-		MIT1002_02833	0.36	-3.5
3,141,415	-		MIT1002_02833	0.37	-5.6
3,141,474	+		MIT1002_02833	0.40	-6.6
3,141,474	+		MIT1002_02833	0.40	-4.4
3,141,501	+		MIT1002_02833	0.41	-1.4