Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02757

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
3,060,358	-				-0.3
3,060,358	-				-0.6
3,060,412	+				-1.0
3,060,463	+				+1.0
3,060,530	-				+0.3
3,060,530	-				-1.1
3,060,564	+				-0.5
3,060,616	-				+0.9
3,060,640	-				+1.8
3,060,666	-				+0.0
3,060,729	-				-1.5
3,061,374	-				+0.5
3,061,376	+				-3.2
3,061,384	-				-1.2
3,061,600	-		MIT1002_02757	0.11	-2.7
3,061,642	+		MIT1002_02757	0.12	-3.3
3,061,649	-		MIT1002_02757	0.13	-5.0
3,061,652	+		MIT1002_02757	0.13	-1.8
3,061,786	+		MIT1002_02757	0.18	-1.6
3,061,832	+		MIT1002_02757	0.20	-2.0
3,061,869	+		MIT1002_02757	0.22	-3.9
3,061,869	-		MIT1002_02757	0.22	-3.1
3,061,877	+		MIT1002_02757	0.22	-1.9
3,061,881	+		MIT1002_02757	0.22	-2.4
3,061,885	-		MIT1002_02757	0.23	-2.2
3,061,891	+		MIT1002_02757	0.23	-4.6
3,061,973	+		MIT1002_02757	0.26	-2.7
3,061,975	+		MIT1002_02757	0.26	-2.5
3,061,988	-		MIT1002_02757	0.27	-4.3
3,061,988	-		MIT1002_02757	0.27	-2.2
3,061,988	-		MIT1002_02757	0.27	-3.7
3,062,040	+		MIT1002_02757	0.29	-2.2
3,062,073	+		MIT1002_02757	0.31	-1.1
3,062,285	+		MIT1002_02757	0.40	-2.1
3,062,292	-		MIT1002_02757	0.40	-3.2
3,062,292	-		MIT1002_02757	0.40	-1.5
3,062,377	-		MIT1002_02757	0.44	-0.5
3,062,384	-		MIT1002_02757	0.44	-1.7
3,062,531	+		MIT1002_02757	0.50	-2.4
3,062,658	-		MIT1002_02757	0.56	-2.4
3,062,737	-		MIT1002_02757	0.59	-3.7
3,062,749	+		MIT1002_02757	0.59	-3.1
3,062,997	+		MIT1002_02757	0.70	-1.4
3,062,997	+		MIT1002_02757	0.70	-3.3
3,062,997	+		MIT1002_02757	0.70	-3.9
3,062,997	+		MIT1002_02757	0.70	-2.6
3,063,005	-		MIT1002_02757	0.70	-1.1
3,063,005	-		MIT1002_02757	0.70	-2.2
3,063,005	-		MIT1002_02757	0.70	-2.2
3,063,104	+		MIT1002_02757	0.74	-2.3
3,063,129	-		MIT1002_02757	0.76	-1.9
3,063,133	+		MIT1002_02757	0.76	-1.8
3,063,133	+		MIT1002_02757	0.76	-4.2
3,063,250	-		MIT1002_02757	0.81	-3.0
3,063,282	-		MIT1002_02757	0.82	-3.2
3,063,319	+		MIT1002_02757	0.84	-3.0
3,063,495	+				-1.5
3,063,495	+				-3.0
3,063,495	+				-3.9
3,063,503	-				-2.4
3,063,503	-				-5.1
3,063,588	-				-3.5
3,063,622	-				-3.2
3,063,795	+				-1.2
3,063,817	-				-0.7