Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02638

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
2,930,196	-		MIT1002_02636	0.60	-5.6
2,930,209	+		MIT1002_02636	0.62	-5.7
2,930,214	+		MIT1002_02636	0.63	-5.7
2,930,270	+		MIT1002_02636	0.72	-1.4
2,930,288	+		MIT1002_02636	0.74	-1.1
2,930,288	+		MIT1002_02636	0.74	-5.8
2,930,520	+				-4.0
2,930,537	-		MIT1002_02637	0.12	-5.3
2,930,550	+		MIT1002_02637	0.14	-4.4
2,930,645	+		MIT1002_02637	0.27	-5.2
2,930,645	+		MIT1002_02637	0.27	-3.7
2,930,730	+		MIT1002_02637	0.38	-5.3
2,930,730	+		MIT1002_02637	0.38	-4.9
2,930,738	-		MIT1002_02637	0.39	-1.1
2,930,806	+		MIT1002_02637	0.49	-4.8
2,930,820	+		MIT1002_02637	0.50	-2.8
2,930,820	+		MIT1002_02637	0.50	-1.1
2,930,828	-		MIT1002_02637	0.51	-3.9
2,930,828	-		MIT1002_02637	0.51	-2.8
2,930,910	-		MIT1002_02637	0.63	-2.8
2,930,956	+		MIT1002_02637	0.69	-3.4
2,930,981	+		MIT1002_02637	0.72	-4.5
2,930,995	+		MIT1002_02637	0.74	-4.6
2,931,114	+				-5.0
2,931,150	+				-3.9
2,931,265	+		MIT1002_02638	0.12	-4.6
2,931,419	-		MIT1002_02638	0.31	-3.5
2,931,477	+		MIT1002_02638	0.38	-1.4
2,931,477	+		MIT1002_02638	0.38	-4.2
2,931,485	-		MIT1002_02638	0.39	-4.2
2,931,485	-		MIT1002_02638	0.39	-4.8
2,931,490	-		MIT1002_02638	0.40	-5.8
2,931,505	-		MIT1002_02638	0.42	-4.1
2,931,527	+		MIT1002_02638	0.44	-3.2
2,931,527	+		MIT1002_02638	0.44	-3.7
2,931,694	+		MIT1002_02638	0.65	-7.9
2,931,742	+		MIT1002_02638	0.71	-4.8
2,931,742	+		MIT1002_02638	0.71	-2.9
2,931,750	-		MIT1002_02638	0.72	-4.8
2,931,750	-		MIT1002_02638	0.72	-5.4
2,931,750	-		MIT1002_02638	0.72	-7.5
2,931,782	+		MIT1002_02638	0.76	-5.1
2,931,795	-		MIT1002_02638	0.77	-2.3
2,931,836	+		MIT1002_02638	0.82	-5.3
2,931,895	+		MIT1002_02638	0.90	-0.7
2,931,903	-				-4.7
2,931,903	-				-2.7
2,931,939	-				-4.7
2,931,945	+				-1.0
2,931,958	+				-0.2
2,931,966	+				+0.9
2,931,974	-				-2.2
2,932,059	+		MIT1002_02639	0.13	-3.7
2,932,069	+		MIT1002_02639	0.15	-3.2
2,932,080	+		MIT1002_02639	0.17	-1.7
2,932,080	+		MIT1002_02639	0.17	-4.2
2,932,080	+		MIT1002_02639	0.17	-5.9
2,932,088	-		MIT1002_02639	0.18	-4.5
2,932,112	+		MIT1002_02639	0.22	-6.3
2,932,153	-		MIT1002_02639	0.29	-3.7
2,932,153	-		MIT1002_02639	0.29	-3.8
2,932,179	-		MIT1002_02639	0.33	-2.3
2,932,259	-		MIT1002_02639	0.46	-3.0
2,932,259	-		MIT1002_02639	0.46	-3.4
2,932,292	+		MIT1002_02639	0.51	-4.1
2,932,307	-		MIT1002_02639	0.54	-6.0
2,932,330	+		MIT1002_02639	0.57	-5.7
2,932,330	+		MIT1002_02639	0.57	-3.8
2,932,338	-		MIT1002_02639	0.59	-4.7
2,932,385	+		MIT1002_02639	0.66	-4.4
2,932,415	-		MIT1002_02639	0.71	-5.9
2,932,473	-		MIT1002_02639	0.80	-4.3
2,932,676	-				-2.0
2,932,694	+				+0.8
2,932,694	+				+0.6
2,932,694	+				+1.2
2,932,797	+				-0.1
2,932,807	-				-0.3
2,932,861	-		MIT1002_02640	0.13	-0.4
2,932,888	+		MIT1002_02640	0.16	-0.3
2,932,890	+		MIT1002_02640	0.16	-3.3
2,932,910	+		MIT1002_02640	0.18	+0.5
2,932,910	+		MIT1002_02640	0.18	-1.9
2,932,910	+		MIT1002_02640	0.18	-0.3
2,932,910	+		MIT1002_02640	0.18	+0.2
2,932,913	-		MIT1002_02640	0.19	-0.3
2,932,918	-		MIT1002_02640	0.19	-0.2