Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02604

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
2,903,089	+				+0.7
2,903,202	+				-0.8
2,903,210	-				-1.6
2,903,210	-				-0.2
2,903,210	-				+0.6
2,903,210	-				+0.6
2,903,210	-				-0.1
2,903,210	-				+0.3
2,903,210	-				-0.9
2,903,210	-				+0.0
2,903,215	-				-0.1
2,903,299	+		MIT1002_02603	0.14	+1.5
2,903,328	-		MIT1002_02603	0.18	-0.6
2,903,359	+		MIT1002_02603	0.22	-0.1
2,903,444	-		MIT1002_02603	0.34	+0.4
2,903,449	+		MIT1002_02603	0.34	+0.4
2,903,467	-		MIT1002_02603	0.37	+0.8
2,903,602	-		MIT1002_02603	0.55	+0.1
2,903,618	-		MIT1002_02603	0.57	+0.5
2,903,647	+		MIT1002_02603	0.61	-0.2
2,903,702	+		MIT1002_02603	0.68	-0.3
2,903,702	+		MIT1002_02603	0.68	+0.5
2,903,702	+		MIT1002_02603	0.68	+0.2
2,903,702	+		MIT1002_02603	0.68	+2.0
2,903,702	+		MIT1002_02603	0.68	+0.5
2,903,702	+		MIT1002_02603	0.68	+0.2
2,903,710	-		MIT1002_02603	0.69	+0.4
2,903,710	-		MIT1002_02603	0.69	-0.2
2,903,710	-		MIT1002_02603	0.69	+0.4
2,903,710	-		MIT1002_02603	0.69	+0.2
2,903,710	-		MIT1002_02603	0.69	+0.6
2,903,710	-		MIT1002_02603	0.69	-0.3
2,903,715	-		MIT1002_02603	0.70	-1.5
2,903,720	-		MIT1002_02603	0.70	-0.1
2,903,730	-		MIT1002_02603	0.72	-1.4
2,903,730	-		MIT1002_02603	0.72	+0.3
2,903,730	-		MIT1002_02603	0.72	-0.8
2,903,730	-		MIT1002_02603	0.72	-0.1
2,903,768	+		MIT1002_02603	0.77	-0.3
2,903,789	-		MIT1002_02603	0.79	-1.6
2,903,871	-				-1.3
2,903,874	+				-0.9
2,903,874	+				+0.2
2,903,987	+				-0.7
2,904,128	-				+0.4
2,904,150	-				-0.8
2,904,214	-		MIT1002_02604	0.15	+0.4
2,904,257	-		MIT1002_02604	0.20	+0.6
2,904,407	+		MIT1002_02604	0.36	+0.4
2,904,417	+		MIT1002_02604	0.38	-0.2
2,904,425	-		MIT1002_02604	0.38	+0.8
2,904,586	+		MIT1002_02604	0.56	+0.5
2,904,594	-		MIT1002_02604	0.57	+0.5
2,904,613	+		MIT1002_02604	0.59	+0.3
2,904,615	-		MIT1002_02604	0.59	+0.8
2,904,621	+		MIT1002_02604	0.60	-0.0
2,904,621	+		MIT1002_02604	0.60	-0.1
2,904,627	-		MIT1002_02604	0.61	-3.0
2,904,629	-		MIT1002_02604	0.61	+0.5
2,904,680	-		MIT1002_02604	0.67	+0.7
2,904,680	-		MIT1002_02604	0.67	+0.6
2,904,732	-		MIT1002_02604	0.72	-0.3
2,904,783	+		MIT1002_02604	0.78	+0.1
2,904,798	+		MIT1002_02604	0.80	+0.1
2,904,801	-		MIT1002_02604	0.80	-0.2
2,904,801	-		MIT1002_02604	0.80	-0.3
2,904,806	-		MIT1002_02604	0.80	-1.2
2,904,831	-		MIT1002_02604	0.83	-0.4
2,904,871	-		MIT1002_02604	0.88	-0.9
2,904,939	+				+0.0
2,904,949	-				+0.7
2,904,949	-				-2.1
2,904,949	-				-0.4
2,904,971	+				-1.0
2,905,078	+				+0.4
2,905,125	+				+0.9
2,905,182	+				+0.8
2,905,182	+				+0.2
2,905,190	-				-0.3
2,905,241	+				+1.0
2,905,283	-				+0.6
2,905,284	-				+1.2
2,905,310	-				+1.5
2,905,312	+				+0.4
2,905,383	+		MIT1002_02605	0.20	+0.7
2,905,383	+		MIT1002_02605	0.20	+0.3
2,905,383	+		MIT1002_02605	0.20	-1.5
2,905,383	+		MIT1002_02605	0.20	-0.1
2,905,383	+		MIT1002_02605	0.20	-1.0
2,905,383	+		MIT1002_02605	0.20	+0.4
2,905,383	+		MIT1002_02605	0.20	-3.1
2,905,383	+		MIT1002_02605	0.20	+0.6
2,905,383	+		MIT1002_02605	0.20	-0.3
2,905,383	+		MIT1002_02605	0.20	-1.0
2,905,391	-		MIT1002_02605	0.21	+0.2
2,905,391	-		MIT1002_02605	0.21	+1.1
2,905,391	-		MIT1002_02605	0.21	+0.7
2,905,393	+		MIT1002_02605	0.21	+0.4
2,905,393	+		MIT1002_02605	0.21	+0.6
2,905,401	-		MIT1002_02605	0.23	+0.9
2,905,401	-		MIT1002_02605	0.23	+0.2
2,905,475	+		MIT1002_02605	0.35	-0.1
2,905,475	+		MIT1002_02605	0.35	-0.8
2,905,475	+		MIT1002_02605	0.35	-0.3
2,905,478	-		MIT1002_02605	0.35	+0.8
2,905,483	-		MIT1002_02605	0.36	-0.0
2,905,483	-		MIT1002_02605	0.36	-2.3
2,905,483	-		MIT1002_02605	0.36	+0.1
2,905,483	-		MIT1002_02605	0.36	+0.5
2,905,483	-		MIT1002_02605	0.36	-0.6
2,905,578	-		MIT1002_02605	0.52	+1.3
2,905,621	-		MIT1002_02605	0.59	-1.0
2,905,695	+		MIT1002_02605	0.71	-0.1
2,905,695	+		MIT1002_02605	0.71	+0.9
2,905,697	+		MIT1002_02605	0.71	+0.8
2,905,702	+		MIT1002_02605	0.72	+0.8
2,905,702	+		MIT1002_02605	0.72	+0.9
2,905,702	+		MIT1002_02605	0.72	-0.1
2,905,702	+		MIT1002_02605	0.72	-1.1
2,905,702	+		MIT1002_02605	0.72	-0.8
2,905,702	+		MIT1002_02605	0.72	-0.0
2,905,702	+		MIT1002_02605	0.72	-0.1
2,905,702	+		MIT1002_02605	0.72	+1.6
2,905,702	+		MIT1002_02605	0.72	-2.9
2,905,702	+		MIT1002_02605	0.72	-0.5
2,905,702	+		MIT1002_02605	0.72	+0.2
2,905,702	+		MIT1002_02605	0.72	+1.2
2,905,702	+		MIT1002_02605	0.72	-2.0
2,905,702	+		MIT1002_02605	0.72	+1.1
2,905,702	+		MIT1002_02605	0.72	+0.2
2,905,702	+		MIT1002_02605	0.72	-0.5
2,905,710	-		MIT1002_02605	0.73	-0.4
2,905,710	-		MIT1002_02605	0.73	-0.4
2,905,710	-		MIT1002_02605	0.73	-0.4
2,905,710	-		MIT1002_02605	0.73	-0.1
2,905,710	-		MIT1002_02605	0.73	+0.0
2,905,710	-		MIT1002_02605	0.73	+1.4
2,905,710	-		MIT1002_02605	0.73	+1.0
2,905,710	-		MIT1002_02605	0.73	-0.3
2,905,710	-		MIT1002_02605	0.73	-0.2
2,905,710	-		MIT1002_02605	0.73	-0.7
2,905,710	-		MIT1002_02605	0.73	-0.6
2,905,715	-		MIT1002_02605	0.74	+0.6
2,905,718	-		MIT1002_02605	0.75	-0.8
2,905,725	+		MIT1002_02605	0.76	-0.5
2,905,725	+		MIT1002_02605	0.76	+0.8
2,905,725	+		MIT1002_02605	0.76	+0.8
2,905,727	+		MIT1002_02605	0.76	+0.6
2,905,727	+		MIT1002_02605	0.76	+0.5
2,905,780	-		MIT1002_02605	0.85	+0.3
2,905,780	-		MIT1002_02605	0.85	+0.1
2,905,780	-		MIT1002_02605	0.85	-0.1
2,905,780	-		MIT1002_02605	0.85	+0.1
2,905,780	-		MIT1002_02605	0.85	-3.2
2,905,780	-		MIT1002_02605	0.85	+0.5
2,905,780	-		MIT1002_02605	0.85	+1.0
2,905,780	-		MIT1002_02605	0.85	+1.5
2,905,780	-		MIT1002_02605	0.85	+0.3
2,905,780	-		MIT1002_02605	0.85	+0.3
2,905,867	+				+0.0
2,905,867	+				+0.2
2,905,867	+				+0.6
2,905,867	+				+0.7
2,905,867	+				-1.9
2,905,886	+				-0.9
2,905,887	+				-2.2
2,905,890	+				+0.2
2,905,891	+				-0.4
2,905,891	+				+0.9
2,905,891	+				+0.3
2,905,891	+				-0.3
2,905,894	-				-0.2
2,905,894	-				-0.4
2,905,894	-				+0.6
2,905,896	+				+0.1
2,905,896	+				-0.5
2,905,896	+				+0.2
2,905,896	+				-0.2
2,905,896	+				+0.0
2,905,896	+				-1.7
2,905,896	+				-0.7
2,905,896	+				+0.2
2,905,898	+				+0.5
2,905,906	-				-2.1
2,905,907	-				-0.2
2,905,908	-				+0.9
2,905,911	+				+0.1
2,905,938	+				+0.0
2,905,945	+				-1.3
2,905,945	+				-0.6
2,905,953	-				-0.8