Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02452

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
2,736,514	+				-0.4
2,736,514	+				+0.2
2,736,514	+				+1.0
2,736,522	-				-0.6
2,736,637	-		MIT1002_02451	0.15	+1.9
2,736,637	-		MIT1002_02451	0.15	+0.1
2,736,660	-		MIT1002_02451	0.17	+0.6
2,736,694	-		MIT1002_02451	0.21	-1.8
2,736,696	+		MIT1002_02451	0.21	-0.5
2,736,736	-		MIT1002_02451	0.26	-0.1
2,736,795	-		MIT1002_02451	0.32	+0.2
2,736,797	+		MIT1002_02451	0.33	+0.1
2,736,843	-		MIT1002_02451	0.38	-1.5
2,736,940	-		MIT1002_02451	0.49	+0.0
2,736,956	+		MIT1002_02451	0.51	+2.0
2,736,964	-		MIT1002_02451	0.51	+0.2
2,736,998	-		MIT1002_02451	0.55	+0.4
2,737,066	-		MIT1002_02451	0.63	-0.6
2,737,114	-		MIT1002_02451	0.68	-0.3
2,737,227	+		MIT1002_02451	0.81	+0.2
2,737,261	-		MIT1002_02451	0.85	-0.2
2,737,261	-		MIT1002_02451	0.85	+1.2
2,737,294	-		MIT1002_02451	0.89	-1.0
2,737,324	-				+0.5
2,737,353	+				-1.3
2,737,361	-				+0.4
2,737,485	+				-1.5
2,737,485	+				-0.5
2,737,493	-				+0.5
2,737,500	+				-0.2
2,737,631	-		MIT1002_02452	0.20	-0.0
2,737,644	+		MIT1002_02452	0.22	+0.4
2,737,722	-		MIT1002_02452	0.35	+0.3
2,737,726	+		MIT1002_02452	0.35	+0.8
2,737,726	+		MIT1002_02452	0.35	+0.5
2,737,726	+		MIT1002_02452	0.35	+0.4
2,737,726	+		MIT1002_02452	0.35	-0.8
2,737,726	+		MIT1002_02452	0.35	+1.1
2,737,734	-		MIT1002_02452	0.37	+0.1
2,737,734	-		MIT1002_02452	0.37	+1.5
2,737,781	-		MIT1002_02452	0.44	-2.2
2,737,837	+		MIT1002_02452	0.53	-2.2
2,737,965	+		MIT1002_02452	0.74	+0.1
2,738,133	+				+0.8
2,738,141	-				+2.2
2,738,141	-				-0.2
2,738,141	-				-1.5
2,738,158	-				+1.0
2,738,200	-				+0.2
2,738,225	+				-2.0
2,738,231	-				-0.0
2,738,231	-				+0.8
2,738,233	-				+0.1
2,738,267	+				-0.2
2,738,283	+				+0.3
2,738,438	-				+1.4
2,738,483	+				-0.7
2,738,483	-				+0.8
2,738,539	-		MIT1002_02453	0.10	+0.9
2,738,599	+		MIT1002_02453	0.12	-1.1
2,738,690	+		MIT1002_02453	0.14	-0.4
2,738,700	+		MIT1002_02453	0.14	-1.2
2,738,708	-		MIT1002_02453	0.14	+0.7
2,738,731	+		MIT1002_02453	0.15	-0.5
2,738,757	+		MIT1002_02453	0.16	-0.3
2,738,757	+		MIT1002_02453	0.16	-0.0
2,738,789	+		MIT1002_02453	0.16	+1.6
2,738,825	+		MIT1002_02453	0.17	+1.1
2,738,890	+		MIT1002_02453	0.19	+0.6
2,738,934	+		MIT1002_02453	0.20	+1.1
2,738,934	+		MIT1002_02453	0.20	-0.5
2,739,019	+		MIT1002_02453	0.22	-1.4
2,739,026	-		MIT1002_02453	0.22	+0.3
2,739,026	-		MIT1002_02453	0.22	+0.3
2,739,107	+		MIT1002_02453	0.24	+0.5