Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01789

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
1,989,799	-		MIT1002_01788	0.54	-0.7
1,989,823	+		MIT1002_01788	0.56	+0.7
1,989,850	-		MIT1002_01788	0.58	-0.8
1,989,884	-		MIT1002_01788	0.60	-0.1
1,989,932	-		MIT1002_01788	0.63	+0.2
1,989,986	+		MIT1002_01788	0.67	-1.3
1,989,989	-		MIT1002_01788	0.67	-2.0
1,990,030	+		MIT1002_01788	0.70	-0.1
1,990,044	+		MIT1002_01788	0.71	-0.8
1,990,086	-		MIT1002_01788	0.74	-0.9
1,990,086	-		MIT1002_01788	0.74	-0.1
1,990,093	+		MIT1002_01788	0.74	-0.1
1,990,093	+		MIT1002_01788	0.74	-0.8
1,990,101	-		MIT1002_01788	0.75	-0.4
1,990,101	-		MIT1002_01788	0.75	+0.6
1,990,101	-		MIT1002_01788	0.75	-0.1
1,990,101	-		MIT1002_01788	0.75	+0.5
1,990,101	-		MIT1002_01788	0.75	-0.5
1,990,101	-		MIT1002_01788	0.75	+0.5
1,990,101	-		MIT1002_01788	0.75	-2.2
1,990,158	-		MIT1002_01788	0.79	+0.7
1,990,196	+		MIT1002_01788	0.81	-0.6
1,990,256	+		MIT1002_01788	0.85	+0.4
1,990,321	+		MIT1002_01788	0.89	+0.5
1,990,359	-				-2.5
1,990,391	-				+0.1
1,990,544	+				+0.3
1,990,629	+				-0.6
1,990,947	+		MIT1002_01789	0.27	-0.3
1,990,955	-		MIT1002_01789	0.29	+0.5
1,990,963	+		MIT1002_01789	0.30	-0.2
1,991,016	+		MIT1002_01789	0.39	-1.3
1,991,016	+		MIT1002_01789	0.39	+0.2
1,991,024	-		MIT1002_01789	0.41	+2.0
1,991,024	-		MIT1002_01789	0.41	+0.1
1,991,093	-		MIT1002_01789	0.53	+2.6
1,991,194	+		MIT1002_01789	0.70	+1.7
1,991,460	+				+0.6
1,991,468	-				-0.6
1,991,482	-				-0.3
1,991,510	+				+0.2
1,991,563	-				-0.6
1,991,578	+				-0.2
1,991,657	+				-1.3
1,991,657	+				+0.4
1,991,657	+				+0.7
1,991,657	+				-0.7
1,991,660	-				+0.0
1,991,665	-				+0.8
1,991,848	+		MIT1002_01790	0.26	-0.1
1,991,856	-		MIT1002_01790	0.26	-1.2
1,991,856	-		MIT1002_01790	0.26	-2.9
1,991,910	+		MIT1002_01790	0.31	-1.2
1,991,941	+		MIT1002_01790	0.34	-0.5
1,991,949	-		MIT1002_01790	0.35	-0.6
1,991,949	-		MIT1002_01790	0.35	-0.3
1,991,949	-		MIT1002_01790	0.35	+0.5
1,991,949	-		MIT1002_01790	0.35	-0.6
1,992,014	-		MIT1002_01790	0.41	-0.4
1,992,071	+		MIT1002_01790	0.46	+0.6
1,992,116	+		MIT1002_01790	0.51	+0.3
1,992,132	+		MIT1002_01790	0.52	+0.7
1,992,132	+		MIT1002_01790	0.52	+1.4
1,992,132	+		MIT1002_01790	0.52	+1.0
1,992,132	+		MIT1002_01790	0.52	+0.1
1,992,140	-		MIT1002_01790	0.53	-0.2
1,992,155	-		MIT1002_01790	0.54	+1.2
1,992,170	+		MIT1002_01790	0.56	+0.2
1,992,282	+		MIT1002_01790	0.66	-0.0
1,992,290	-		MIT1002_01790	0.67	-0.6
1,992,290	-		MIT1002_01790	0.67	-0.3
1,992,302	-		MIT1002_01790	0.68	+0.2