Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01129

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
1,243,814	-				-2.5
1,243,814	-				-3.0
1,243,881	-				-3.9
1,243,886	+				-1.8
1,243,928	+		MIT1002_01129	0.16	-3.7
1,243,928	+		MIT1002_01129	0.16	-2.5
1,243,944	-		MIT1002_01129	0.24	-4.2
1,243,953	-		MIT1002_01129	0.29	-1.7
1,243,954	-		MIT1002_01129	0.30	-3.7
1,244,078	+				-1.4
1,244,122	-				-0.1
1,244,123	+				-0.5
1,244,174	+				-0.7
1,244,230	+				-0.3
1,244,236	+				+0.7
1,244,236	+				+0.2
1,244,236	+				+0.1
1,244,244	-				-0.0
1,244,244	-				-0.7
1,244,279	+				-1.5
1,244,280	+				-0.5
1,244,288	-				-0.3
1,244,307	+				-0.7
1,244,315	-				+0.5
1,244,315	-				+1.0
1,244,315	-				-0.4
1,244,472	-				+0.9
1,244,787	+				-0.6
1,244,814	+		MIT1002_01131	0.40	+0.4
1,244,891	+				-0.3
1,244,925	-		MIT1002_01132	0.16	-0.9
1,245,082	-				-0.6