Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01114

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
1,220,401	-				-0.8
1,220,418	-				-0.2
1,220,489	-		MIT1002_01113	0.16	-0.4
1,220,593	-		MIT1002_01113	0.25	-0.9
1,220,628	+		MIT1002_01113	0.29	-0.5
1,220,635	-		MIT1002_01113	0.29	+0.8
1,220,704	-		MIT1002_01113	0.36	-3.2
1,220,727	+		MIT1002_01113	0.38	-1.1
1,220,759	+		MIT1002_01113	0.41	+1.9
1,220,778	-		MIT1002_01113	0.43	-1.7
1,220,838	-		MIT1002_01113	0.48	-0.8
1,220,950	-		MIT1002_01113	0.59	-0.7
1,221,042	+		MIT1002_01113	0.67	-1.0
1,221,090	+		MIT1002_01113	0.72	+1.2
1,221,090	+		MIT1002_01113	0.72	-0.8
1,221,152	+		MIT1002_01113	0.78	-1.3
1,221,152	+		MIT1002_01113	0.78	+0.6
1,221,160	-		MIT1002_01113	0.78	+1.0
1,221,160	-		MIT1002_01113	0.78	+0.5
1,221,160	-		MIT1002_01113	0.78	-0.3
1,221,230	+		MIT1002_01113	0.85	-0.1
1,221,236	+		MIT1002_01113	0.86	-0.6
1,221,244	-		MIT1002_01113	0.86	-1.4
1,221,244	-		MIT1002_01113	0.86	-1.7
1,221,277	+		MIT1002_01113	0.89	-0.3
1,221,324	-				+1.6
1,221,367	+				+0.0
1,221,384	+				+0.9
1,221,392	-				-1.8
1,221,525	+				-0.2
1,221,535	+				-0.4
1,221,577	+				-0.1
1,221,577	+				-0.6
1,221,585	-				-2.2
1,221,585	-				-0.2
1,221,588	+				-3.7
1,221,624	-				-0.5
1,221,630	-				-0.1
1,221,684	+		MIT1002_01114	0.11	+0.3
1,221,684	+		MIT1002_01114	0.11	-0.3
1,221,685	+		MIT1002_01114	0.11	-2.5
1,221,686	+		MIT1002_01114	0.11	-3.0
1,221,692	-		MIT1002_01114	0.11	-1.1
1,221,814	+		MIT1002_01114	0.16	+0.2
1,221,824	+		MIT1002_01114	0.16	-1.5
1,221,865	+		MIT1002_01114	0.18	-1.1
1,221,868	-		MIT1002_01114	0.18	-0.1
1,221,873	-		MIT1002_01114	0.18	+0.4
1,221,954	-		MIT1002_01114	0.21	-0.3
1,221,954	-		MIT1002_01114	0.21	-0.9
1,222,084	+		MIT1002_01114	0.26	-1.2
1,222,087	-		MIT1002_01114	0.26	+0.2
1,222,116	+		MIT1002_01114	0.27	+0.1
1,222,125	+		MIT1002_01114	0.28	-0.2
1,222,133	-		MIT1002_01114	0.28	-0.2
1,222,133	-		MIT1002_01114	0.28	-0.0
1,222,265	+		MIT1002_01114	0.33	+0.5
1,222,307	-		MIT1002_01114	0.35	-0.9
1,222,421	-		MIT1002_01114	0.39	-1.5
1,222,455	-		MIT1002_01114	0.40	+0.2
1,222,555	-		MIT1002_01114	0.44	-0.6
1,222,659	-		MIT1002_01114	0.48	-0.8
1,222,768	+		MIT1002_01114	0.52	-0.7
1,222,776	-		MIT1002_01114	0.52	-1.0
1,222,777	-		MIT1002_01114	0.52	-0.4
1,222,828	+		MIT1002_01114	0.54	-0.6
1,222,869	-		MIT1002_01114	0.56	-1.9
1,222,945	+		MIT1002_01114	0.59	-1.2
1,223,073	-		MIT1002_01114	0.64	-0.9
1,223,110	-		MIT1002_01114	0.65	+0.5
1,223,140	-		MIT1002_01114	0.66	-0.2
1,223,228	+		MIT1002_01114	0.70	-0.6
1,223,545	+		MIT1002_01114	0.82	-2.4
1,223,545	+		MIT1002_01114	0.82	-1.1
1,223,553	-		MIT1002_01114	0.82	-1.7
1,223,595	-		MIT1002_01114	0.84	-2.2
1,223,617	-		MIT1002_01114	0.84	-0.2
1,223,675	+		MIT1002_01114	0.87	-0.2
1,223,692	-		MIT1002_01114	0.87	-2.2
1,223,759	+		MIT1002_01114	0.90	-0.7
1,223,825	+				-1.5
1,223,832	+				-1.2
1,223,840	-				-0.9
1,223,840	-				-0.7
1,223,857	-				-0.4
1,223,863	+				-0.9
1,223,908	-				-1.9
1,223,908	-				-1.5
1,223,951	+				-0.2
1,223,957	+				-0.8
1,223,957	+				-1.9
1,223,959	-				-1.0
1,223,970	+				-0.6
1,224,026	-				+0.1
1,224,028	+				-3.1
1,224,042	+				+0.0
1,224,069	-				-0.1
1,224,071	-				+0.7
1,224,081	-				+0.1
1,224,148	-		MIT1002_01115	0.17	+1.2
1,224,162	-		MIT1002_01115	0.19	-0.1
1,224,164	+		MIT1002_01115	0.20	+0.8
1,224,164	+		MIT1002_01115	0.20	-0.3
1,224,164	+		MIT1002_01115	0.20	-1.8
1,224,164	+		MIT1002_01115	0.20	-0.2
1,224,164	+		MIT1002_01115	0.20	+1.3
1,224,164	+		MIT1002_01115	0.20	-0.9
1,224,172	-		MIT1002_01115	0.21	+1.2
1,224,172	-		MIT1002_01115	0.21	+0.5
1,224,243	+		MIT1002_01115	0.33	+0.5
1,224,251	-		MIT1002_01115	0.35	-1.1
1,224,251	-		MIT1002_01115	0.35	+0.8
1,224,264	-		MIT1002_01115	0.37	+0.9
1,224,279	+		MIT1002_01115	0.39	+0.6
1,224,410	+		MIT1002_01115	0.61	-1.7
1,224,410	+		MIT1002_01115	0.61	+0.1
1,224,418	-		MIT1002_01115	0.63	+0.7
1,224,418	-		MIT1002_01115	0.63	-0.1
1,224,453	-		MIT1002_01115	0.69	-0.1
1,224,494	+		MIT1002_01115	0.76	-0.6
1,224,494	+		MIT1002_01115	0.76	-0.6
1,224,565	-		MIT1002_01115	0.88	-1.0
1,224,569	+		MIT1002_01115	0.88	-0.2
1,224,578	-		MIT1002_01115	0.90	+0.3
1,224,701	+				+2.0
1,224,709	-				+0.8
1,224,709	-				-0.4
1,224,709	-				-0.3
1,224,714	+				-1.3
1,224,873	+		MIT1002_01116	0.55	-0.2
1,224,881	-		MIT1002_01116	0.58	-0.7
1,224,925	+		MIT1002_01116	0.73	-1.0
1,224,925	+		MIT1002_01116	0.73	-1.2
1,224,933	-		MIT1002_01116	0.76	+0.4
1,224,933	-		MIT1002_01116	0.76	+0.6
1,224,976	+				-0.6