Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00100

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 2
107,170	+		MIT1002_00099	0.15	+0.1
107,224	+		MIT1002_00099	0.20	-0.5
107,224	+		MIT1002_00099	0.20	-0.6
107,224	+		MIT1002_00099	0.20	+1.2
107,224	+		MIT1002_00099	0.20	+1.2
107,224	+		MIT1002_00099	0.20	-0.4
107,232	-		MIT1002_00099	0.20	-4.0
107,232	-		MIT1002_00099	0.20	-2.8
107,232	-		MIT1002_00099	0.20	-0.8
107,232	-		MIT1002_00099	0.20	-0.6
107,232	-		MIT1002_00099	0.20	-1.1
107,250	+		MIT1002_00099	0.22	-3.3
107,258	-		MIT1002_00099	0.23	-1.9
107,360	+		MIT1002_00099	0.31	-1.6
107,360	+		MIT1002_00099	0.31	-0.9
107,377	+		MIT1002_00099	0.33	-1.9
107,403	-		MIT1002_00099	0.35	-1.8
107,426	+		MIT1002_00099	0.37	-0.2
107,485	+		MIT1002_00099	0.42	-1.1
107,486	+		MIT1002_00099	0.42	-2.3
107,517	+		MIT1002_00099	0.45	-0.5
107,526	-		MIT1002_00099	0.45	-0.4
107,583	+		MIT1002_00099	0.50	-0.5
107,642	+		MIT1002_00099	0.55	+1.2
107,879	+		MIT1002_00099	0.76	-1.8
107,925	-		MIT1002_00099	0.79	-0.4
107,954	-		MIT1002_00099	0.82	+0.1
107,956	+		MIT1002_00099	0.82	-0.0
107,981	+		MIT1002_00099	0.84	-2.8
107,989	-		MIT1002_00099	0.85	+0.4
108,041	+		MIT1002_00099	0.89	-1.9
108,049	-				-4.3
108,054	+				-2.4
108,062	-				-1.8
108,062	-				-1.9
108,062	-				-2.9
108,062	-				+1.8
108,203	-				+0.1
108,283	+		MIT1002_00100	0.10	-2.8
108,424	-		MIT1002_00100	0.22	-1.2
108,424	-		MIT1002_00100	0.22	-0.7
108,459	-		MIT1002_00100	0.25	-1.7
108,459	-		MIT1002_00100	0.25	-2.5
108,459	-		MIT1002_00100	0.25	-2.1
108,459	-		MIT1002_00100	0.25	-1.2
108,464	+		MIT1002_00100	0.26	-2.1
108,538	-		MIT1002_00100	0.32	-0.9
108,538	-		MIT1002_00100	0.32	-3.4
108,538	-		MIT1002_00100	0.32	-2.0
108,538	-		MIT1002_00100	0.32	-2.9
108,559	+		MIT1002_00100	0.34	-2.4
108,619	+		MIT1002_00100	0.39	-3.9
108,627	-		MIT1002_00100	0.40	-2.0
108,628	-		MIT1002_00100	0.40	-0.9
108,650	+		MIT1002_00100	0.42	-2.1
108,672	+		MIT1002_00100	0.43	-2.3
108,680	-		MIT1002_00100	0.44	-0.2
108,692	+		MIT1002_00100	0.45	-1.9
108,692	+		MIT1002_00100	0.45	-3.2
108,692	+		MIT1002_00100	0.45	-3.0
108,700	+		MIT1002_00100	0.46	-2.5
108,700	-		MIT1002_00100	0.46	-0.8
108,702	+		MIT1002_00100	0.46	-1.1
108,710	-		MIT1002_00100	0.47	-1.6
108,718	-		MIT1002_00100	0.47	-2.1
108,793	-		MIT1002_00100	0.54	-2.0
108,890	-		MIT1002_00100	0.62	-1.9
109,070	-		MIT1002_00100	0.77	-2.7
109,129	+		MIT1002_00100	0.82	-1.8
109,197	-		MIT1002_00100	0.88	-4.2
109,346	+				+0.0
110,098	+				+0.9
110,098	+				+2.1
110,106	-				-0.6
110,106	-				-0.5
110,106	-				-0.1