Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS27005

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
6,021,251	-				-0.3
6,021,251	-				-0.3
6,021,330	+				-0.2
6,021,330	+				+0.3
6,021,331	-				+0.3
6,021,331	-				-0.5
6,021,331	-				+0.3
6,021,331	-				+0.0
6,021,442	+		QEN71_RS27000	0.10	+1.0
6,021,443	-		QEN71_RS27000	0.11	-0.1
6,021,443	-		QEN71_RS27000	0.11	-1.2
6,021,577	+		QEN71_RS27000	0.30	-1.2
6,021,577	+		QEN71_RS27000	0.30	+2.8
6,021,577	+		QEN71_RS27000	0.30	+1.4
6,021,577	+		QEN71_RS27000	0.30	+2.7
6,021,577	+		QEN71_RS27000	0.30	+0.2
6,021,577	+		QEN71_RS27000	0.30	+1.5
6,021,577	+		QEN71_RS27000	0.30	-1.5
6,021,577	+		QEN71_RS27000	0.30	+2.9
6,021,577	+		QEN71_RS27000	0.30	+1.2
6,021,577	+		QEN71_RS27000	0.30	+1.4
6,021,577	+		QEN71_RS27000	0.30	+0.5
6,021,578	-		QEN71_RS27000	0.30	+1.5
6,021,578	-		QEN71_RS27000	0.30	-0.3
6,021,578	-		QEN71_RS27000	0.30	-1.4
6,021,578	-		QEN71_RS27000	0.30	+2.2
6,021,578	-		QEN71_RS27000	0.30	+1.6
6,021,645	+		QEN71_RS27000	0.40	+1.2
6,021,645	+		QEN71_RS27000	0.40	+3.6
6,021,645	+		QEN71_RS27000	0.40	+0.3
6,021,645	+		QEN71_RS27000	0.40	+3.0
6,021,645	+		QEN71_RS27000	0.40	+1.0
6,021,646	-		QEN71_RS27000	0.40	-0.9
6,021,649	+		QEN71_RS27000	0.40	+2.3
6,021,649	+		QEN71_RS27000	0.40	+2.1
6,021,649	+		QEN71_RS27000	0.40	+0.1
6,021,649	+		QEN71_RS27000	0.40	+0.8
6,021,649	+		QEN71_RS27000	0.40	+1.0
6,021,649	+		QEN71_RS27000	0.40	-0.7
6,021,649	+		QEN71_RS27000	0.40	+0.8
6,021,649	+		QEN71_RS27000	0.40	-2.8
6,021,649	+		QEN71_RS27000	0.40	+2.7
6,021,650	-		QEN71_RS27000	0.40	+2.1
6,021,650	-		QEN71_RS27000	0.40	-0.9
6,021,650	-		QEN71_RS27000	0.40	-0.1
6,021,650	-		QEN71_RS27000	0.40	+1.3
6,021,650	-		QEN71_RS27000	0.40	-0.3
6,021,650	-		QEN71_RS27000	0.40	+1.1
6,021,650	-		QEN71_RS27000	0.40	+0.5
6,021,650	-		QEN71_RS27000	0.40	-0.6
6,021,650	-		QEN71_RS27000	0.40	-0.2
6,021,650	-		QEN71_RS27000	0.40	-0.1
6,021,650	-		QEN71_RS27000	0.40	+0.7
6,021,650	-		QEN71_RS27000	0.40	-0.8
6,021,650	-		QEN71_RS27000	0.40	+0.9
6,021,650	-		QEN71_RS27000	0.40	+1.8
6,021,738	+		QEN71_RS27000	0.53	+0.9
6,021,810	+		QEN71_RS27000	0.63	-0.2
6,021,810	+		QEN71_RS27000	0.63	-0.6
6,021,810	+		QEN71_RS27000	0.63	+2.9
6,021,810	+		QEN71_RS27000	0.63	+1.1
6,021,811	-		QEN71_RS27000	0.64	+2.2
6,021,811	-		QEN71_RS27000	0.64	-0.0
6,021,811	-		QEN71_RS27000	0.64	-0.8
6,021,811	-		QEN71_RS27000	0.64	-0.2
6,021,811	-		QEN71_RS27000	0.64	-0.9
6,021,811	-		QEN71_RS27000	0.64	-1.4
6,021,811	-		QEN71_RS27000	0.64	-0.5
6,021,811	-		QEN71_RS27000	0.64	+1.1
6,021,811	-		QEN71_RS27000	0.64	+0.6
6,021,852	+		QEN71_RS27000	0.70	+1.6
6,021,852	+		QEN71_RS27000	0.70	-0.7
6,021,852	+		QEN71_RS27000	0.70	+2.8
6,021,852	+		QEN71_RS27000	0.70	-1.1
6,021,852	+		QEN71_RS27000	0.70	+0.6
6,021,852	+		QEN71_RS27000	0.70	+0.0
6,021,852	+		QEN71_RS27000	0.70	-0.2
6,021,873	+		QEN71_RS27000	0.73	-1.2
6,021,873	+		QEN71_RS27000	0.73	+4.1
6,021,874	-		QEN71_RS27000	0.73	+0.4
6,021,904	+		QEN71_RS27000	0.77	+3.2
6,021,905	-		QEN71_RS27000	0.77	+1.7
6,021,905	-		QEN71_RS27000	0.77	+0.4
6,021,927	+		QEN71_RS27000	0.80	-0.2
6,021,927	+		QEN71_RS27000	0.80	+1.8
6,021,927	+		QEN71_RS27000	0.80	-0.1
6,021,927	+		QEN71_RS27000	0.80	+1.4
6,021,927	+		QEN71_RS27000	0.80	+2.6
6,021,927	+		QEN71_RS27000	0.80	+1.1
6,021,927	+		QEN71_RS27000	0.80	+1.8
6,021,927	+		QEN71_RS27000	0.80	-1.5
6,021,928	-		QEN71_RS27000	0.81	-0.2
6,021,928	-		QEN71_RS27000	0.81	+0.4
6,021,928	-		QEN71_RS27000	0.81	-0.7
6,021,928	-		QEN71_RS27000	0.81	+0.4
6,021,928	-		QEN71_RS27000	0.81	+0.6
6,021,931	+		QEN71_RS27000	0.81	+2.5
6,021,931	+		QEN71_RS27000	0.81	-1.3
6,021,931	+		QEN71_RS27000	0.81	+0.7
6,021,931	+		QEN71_RS27000	0.81	+0.6
6,021,931	+		QEN71_RS27000	0.81	-1.2
6,021,931	+		QEN71_RS27000	0.81	-0.7
6,021,931	+		QEN71_RS27000	0.81	+0.9
6,021,931	+		QEN71_RS27000	0.81	-0.9
6,021,931	+		QEN71_RS27000	0.81	-0.9
6,021,931	+		QEN71_RS27000	0.81	+3.3
6,021,931	+		QEN71_RS27000	0.81	+2.3
6,021,931	+		QEN71_RS27000	0.81	+0.1
6,021,931	+		QEN71_RS27000	0.81	+1.1
6,021,931	+		QEN71_RS27000	0.81	+0.8
6,021,932	-		QEN71_RS27000	0.81	+0.5
6,021,932	-		QEN71_RS27000	0.81	+1.5
6,021,932	-		QEN71_RS27000	0.81	-0.7
6,021,932	-		QEN71_RS27000	0.81	-1.0
6,021,932	-		QEN71_RS27000	0.81	+0.5
6,021,932	-		QEN71_RS27000	0.81	+1.3
6,021,932	-		QEN71_RS27000	0.81	+0.7
6,021,932	-		QEN71_RS27000	0.81	-2.0
6,021,932	-		QEN71_RS27000	0.81	-1.5
6,021,932	-		QEN71_RS27000	0.81	+1.7
6,021,932	-		QEN71_RS27000	0.81	+1.7
6,021,932	-		QEN71_RS27000	0.81	+0.2
6,021,932	-		QEN71_RS27000	0.81	+0.2
6,021,932	-		QEN71_RS27000	0.81	-0.8
6,021,932	-		QEN71_RS27000	0.81	-0.9
6,021,963	+		QEN71_RS27000	0.86	+0.6
6,021,963	+		QEN71_RS27000	0.86	+2.8
6,021,997	-				+1.3
6,022,015	-				-1.9
6,022,039	+				+0.1
6,022,040	-				+0.9
6,022,040	-				+0.2
6,022,040	-				+0.5
6,022,040	-				+0.9
6,022,040	-				+0.9
6,022,156	+				-0.0
6,022,156	+				-0.1
6,022,156	+				-3.3
6,022,157	-				-0.3
6,022,157	-				+0.8
6,022,157	-				-0.1
6,022,157	-				-0.2
6,022,157	-				-0.3
6,022,157	-				-0.1
6,022,160	-				+1.2
6,022,160	-				-1.3
6,022,250	+				-1.2
6,022,250	+				+1.4
6,022,251	-				-0.7
6,022,287	+				-2.3
6,022,425	+		QEN71_RS27005	0.17	-4.1
6,022,426	-		QEN71_RS27005	0.18	-3.6
6,022,426	-		QEN71_RS27005	0.18	-4.1
6,022,426	-		QEN71_RS27005	0.18	-0.7
6,022,426	-		QEN71_RS27005	0.18	-1.9
6,022,426	-		QEN71_RS27005	0.18	-2.7
6,022,680	-		QEN71_RS27005	0.43	-4.9
6,022,710	-		QEN71_RS27005	0.46	-1.9
6,022,854	-		QEN71_RS27005	0.60	-1.2
6,023,111	+		QEN71_RS27005	0.85	-1.1
6,023,195	+				-2.8
6,023,264	+				-2.4
6,023,265	-				-1.4
6,023,265	-				-2.6
6,023,265	-				-1.1
6,023,265	-				-2.2
6,023,265	-				+0.2
6,023,265	-				-0.7
6,023,265	-				-0.4
6,023,383	-				-0.6