Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS26995

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
6,019,080	+		QEN71_RS26990	0.42	-0.4
6,019,080	+		QEN71_RS26990	0.42	+0.6
6,019,081	-		QEN71_RS26990	0.42	-0.4
6,019,081	-		QEN71_RS26990	0.42	+0.9
6,019,081	-		QEN71_RS26990	0.42	+0.2
6,019,081	-		QEN71_RS26990	0.42	-0.4
6,019,081	-		QEN71_RS26990	0.42	-0.9
6,019,081	-		QEN71_RS26990	0.42	+1.3
6,019,081	-		QEN71_RS26990	0.42	+2.5
6,019,081	-		QEN71_RS26990	0.42	-1.2
6,019,081	-		QEN71_RS26990	0.42	+0.2
6,019,158	+		QEN71_RS26990	0.50	-0.0
6,019,191	+		QEN71_RS26990	0.53	-0.2
6,019,242	+		QEN71_RS26990	0.58	-0.2
6,019,242	+		QEN71_RS26990	0.58	+0.3
6,019,242	+		QEN71_RS26990	0.58	+0.3
6,019,242	+		QEN71_RS26990	0.58	+1.4
6,019,242	+		QEN71_RS26990	0.58	-0.7
6,019,242	+		QEN71_RS26990	0.58	-1.1
6,019,242	+		QEN71_RS26990	0.58	+0.0
6,019,243	-		QEN71_RS26990	0.58	+0.4
6,019,243	-		QEN71_RS26990	0.58	-0.8
6,019,243	-		QEN71_RS26990	0.58	-0.7
6,019,243	-		QEN71_RS26990	0.58	+0.9
6,019,243	-		QEN71_RS26990	0.58	+0.3
6,019,243	-		QEN71_RS26990	0.58	+0.1
6,019,243	-		QEN71_RS26990	0.58	+0.6
6,019,326	+		QEN71_RS26990	0.67	+2.7
6,019,326	+		QEN71_RS26990	0.67	+3.3
6,019,327	-		QEN71_RS26990	0.67	+1.1
6,019,327	-		QEN71_RS26990	0.67	-0.2
6,019,327	-		QEN71_RS26990	0.67	-0.2
6,019,378	+		QEN71_RS26990	0.72	+0.1
6,019,379	-		QEN71_RS26990	0.72	-0.4
6,019,431	+		QEN71_RS26990	0.77	+0.4
6,019,432	-		QEN71_RS26990	0.77	+1.9
6,019,432	-		QEN71_RS26990	0.77	+0.1
6,019,448	-		QEN71_RS26990	0.79	-1.0
6,019,448	-		QEN71_RS26990	0.79	-0.6
6,019,448	-		QEN71_RS26990	0.79	-0.8
6,019,497	+		QEN71_RS26990	0.83	-3.5
6,019,497	+		QEN71_RS26990	0.83	-0.1
6,019,497	+		QEN71_RS26990	0.83	+0.3
6,019,498	-		QEN71_RS26990	0.84	+0.9
6,019,498	-		QEN71_RS26990	0.84	+0.1
6,019,498	-		QEN71_RS26990	0.84	-0.1
6,019,498	-		QEN71_RS26990	0.84	+0.4
6,019,498	-		QEN71_RS26990	0.84	-0.4
6,019,498	-		QEN71_RS26990	0.84	-1.2
6,019,614	+				-0.1
6,019,614	+				-1.4
6,019,614	+				+0.4
6,019,615	-				-0.7
6,019,615	-				-0.9
6,019,615	-				+1.9
6,019,657	+				-1.1
6,019,657	+				-0.1
6,019,708	+				+0.5
6,019,708	+				-0.9
6,019,708	+				+0.6
6,019,709	-				-1.8
6,019,727	-				+0.7
6,019,727	-				-0.1
6,020,103	+		QEN71_RS26995	0.23	-1.8
6,020,103	+		QEN71_RS26995	0.23	+0.2
6,020,104	-		QEN71_RS26995	0.24	-0.7
6,020,104	-		QEN71_RS26995	0.24	-0.0
6,020,104	-		QEN71_RS26995	0.24	-0.7
6,020,104	-		QEN71_RS26995	0.24	+2.1
6,020,104	-		QEN71_RS26995	0.24	-0.0
6,020,104	-		QEN71_RS26995	0.24	-1.5
6,020,104	-		QEN71_RS26995	0.24	-0.7
6,020,154	+		QEN71_RS26995	0.27	+0.5
6,020,154	+		QEN71_RS26995	0.27	+0.0
6,020,155	-		QEN71_RS26995	0.27	-1.2
6,020,155	-		QEN71_RS26995	0.27	+0.9
6,020,155	-		QEN71_RS26995	0.27	+0.7
6,020,155	-		QEN71_RS26995	0.27	-1.4
6,020,155	-		QEN71_RS26995	0.27	-0.4
6,020,155	-		QEN71_RS26995	0.27	-0.2
6,020,160	+		QEN71_RS26995	0.28	-0.7
6,020,160	+		QEN71_RS26995	0.28	+1.1
6,020,161	-		QEN71_RS26995	0.28	-1.9
6,020,174	+		QEN71_RS26995	0.29	-1.0
6,020,195	+		QEN71_RS26995	0.30	+0.1
6,020,195	+		QEN71_RS26995	0.30	-0.6
6,020,196	-		QEN71_RS26995	0.30	+0.2
6,020,196	-		QEN71_RS26995	0.30	+0.3
6,020,196	-		QEN71_RS26995	0.30	+0.0
6,020,196	-		QEN71_RS26995	0.30	+0.3
6,020,196	-		QEN71_RS26995	0.30	+0.8
6,020,225	+		QEN71_RS26995	0.33	-1.5
6,020,226	-		QEN71_RS26995	0.33	+1.1
6,020,226	-		QEN71_RS26995	0.33	-1.3
6,020,438	+		QEN71_RS26995	0.49	+1.1
6,020,438	+		QEN71_RS26995	0.49	-0.2
6,020,439	-		QEN71_RS26995	0.49	-0.8
6,020,439	-		QEN71_RS26995	0.49	+2.7
6,020,439	-		QEN71_RS26995	0.49	+0.7
6,020,439	-		QEN71_RS26995	0.49	-1.4
6,020,439	-		QEN71_RS26995	0.49	-0.7
6,020,439	-		QEN71_RS26995	0.49	+0.3
6,020,486	+		QEN71_RS26995	0.52	+0.3
6,020,486	+		QEN71_RS26995	0.52	-0.4
6,020,486	+		QEN71_RS26995	0.52	-0.7
6,020,486	+		QEN71_RS26995	0.52	+0.6
6,020,487	-		QEN71_RS26995	0.52	+0.3
6,020,487	-		QEN71_RS26995	0.52	-1.2
6,020,487	-		QEN71_RS26995	0.52	-2.3
6,020,762	+		QEN71_RS26995	0.73	+0.0
6,020,762	+		QEN71_RS26995	0.73	-0.4
6,020,762	+		QEN71_RS26995	0.73	-0.5
6,020,763	-		QEN71_RS26995	0.73	-0.1
6,020,763	-		QEN71_RS26995	0.73	-0.1
6,020,831	+		QEN71_RS26995	0.78	+1.3
6,020,831	+		QEN71_RS26995	0.78	-2.1
6,020,831	+		QEN71_RS26995	0.78	-0.4
6,020,831	+		QEN71_RS26995	0.78	-0.1
6,020,831	+		QEN71_RS26995	0.78	+0.3
6,020,831	+		QEN71_RS26995	0.78	-0.6
6,020,832	-		QEN71_RS26995	0.78	-0.2
6,020,832	-		QEN71_RS26995	0.78	-1.4
6,020,832	-		QEN71_RS26995	0.78	+0.3
6,020,882	+		QEN71_RS26995	0.82	+1.6
6,020,882	+		QEN71_RS26995	0.82	-1.2
6,020,882	+		QEN71_RS26995	0.82	-0.5
6,020,882	+		QEN71_RS26995	0.82	-0.0
6,020,883	-		QEN71_RS26995	0.82	-0.3
6,020,883	-		QEN71_RS26995	0.82	-1.1
6,020,883	-		QEN71_RS26995	0.82	+0.9
6,020,883	-		QEN71_RS26995	0.82	-1.0
6,020,911	+		QEN71_RS26995	0.84	+0.6
6,020,912	-		QEN71_RS26995	0.84	+1.1
6,020,912	-		QEN71_RS26995	0.84	+2.2
6,020,912	-		QEN71_RS26995	0.84	-0.4
6,021,203	+				+0.0
6,021,203	+				-0.9
6,021,204	-				+0.7
6,021,204	-				-0.5
6,021,204	-				+1.0
6,021,204	-				+0.1
6,021,204	-				+1.6
6,021,204	-				+0.5
6,021,206	+				-0.1
6,021,206	+				+2.3
6,021,206	+				+0.6
6,021,207	-				-0.6
6,021,207	-				+0.3
6,021,207	-				+0.0
6,021,217	+				+2.7
6,021,219	+				-2.5
6,021,219	+				+0.6
6,021,219	+				+1.6
6,021,220	-				+0.2
6,021,220	-				-0.1
6,021,220	-				-2.2
6,021,251	-				-0.3
6,021,251	-				-0.3
6,021,330	+				-0.2
6,021,330	+				+0.3
6,021,331	-				+0.3
6,021,331	-				-0.5
6,021,331	-				+0.3
6,021,331	-				+0.0
6,021,442	+		QEN71_RS27000	0.10	+1.0
6,021,443	-		QEN71_RS27000	0.11	-0.1
6,021,443	-		QEN71_RS27000	0.11	-1.2
6,021,577	+		QEN71_RS27000	0.30	-1.2
6,021,577	+		QEN71_RS27000	0.30	+2.8
6,021,577	+		QEN71_RS27000	0.30	+1.4
6,021,577	+		QEN71_RS27000	0.30	+2.7
6,021,577	+		QEN71_RS27000	0.30	+0.2
6,021,577	+		QEN71_RS27000	0.30	+1.5
6,021,577	+		QEN71_RS27000	0.30	-1.5
6,021,577	+		QEN71_RS27000	0.30	+2.9
6,021,577	+		QEN71_RS27000	0.30	+1.2
6,021,577	+		QEN71_RS27000	0.30	+1.4
6,021,577	+		QEN71_RS27000	0.30	+0.5
6,021,578	-		QEN71_RS27000	0.30	+1.5
6,021,578	-		QEN71_RS27000	0.30	-0.3
6,021,578	-		QEN71_RS27000	0.30	-1.4
6,021,578	-		QEN71_RS27000	0.30	+2.2
6,021,578	-		QEN71_RS27000	0.30	+1.6
6,021,645	+		QEN71_RS27000	0.40	+1.2
6,021,645	+		QEN71_RS27000	0.40	+3.6
6,021,645	+		QEN71_RS27000	0.40	+0.3
6,021,645	+		QEN71_RS27000	0.40	+3.0
6,021,645	+		QEN71_RS27000	0.40	+1.0
6,021,646	-		QEN71_RS27000	0.40	-0.9
6,021,649	+		QEN71_RS27000	0.40	+2.3
6,021,649	+		QEN71_RS27000	0.40	+2.1
6,021,649	+		QEN71_RS27000	0.40	+0.1
6,021,649	+		QEN71_RS27000	0.40	+0.8
6,021,649	+		QEN71_RS27000	0.40	+1.0
6,021,649	+		QEN71_RS27000	0.40	-0.7
6,021,649	+		QEN71_RS27000	0.40	+0.8
6,021,649	+		QEN71_RS27000	0.40	-2.8
6,021,649	+		QEN71_RS27000	0.40	+2.7
6,021,650	-		QEN71_RS27000	0.40	+2.1
6,021,650	-		QEN71_RS27000	0.40	-0.9
6,021,650	-		QEN71_RS27000	0.40	-0.1
6,021,650	-		QEN71_RS27000	0.40	+1.3
6,021,650	-		QEN71_RS27000	0.40	-0.3
6,021,650	-		QEN71_RS27000	0.40	+1.1
6,021,650	-		QEN71_RS27000	0.40	+0.5
6,021,650	-		QEN71_RS27000	0.40	-0.6
6,021,650	-		QEN71_RS27000	0.40	-0.2
6,021,650	-		QEN71_RS27000	0.40	-0.1
6,021,650	-		QEN71_RS27000	0.40	+0.7
6,021,650	-		QEN71_RS27000	0.40	-0.8
6,021,650	-		QEN71_RS27000	0.40	+0.9
6,021,650	-		QEN71_RS27000	0.40	+1.8
6,021,738	+		QEN71_RS27000	0.53	+0.9
6,021,810	+		QEN71_RS27000	0.63	-0.2
6,021,810	+		QEN71_RS27000	0.63	-0.6
6,021,810	+		QEN71_RS27000	0.63	+2.9
6,021,810	+		QEN71_RS27000	0.63	+1.1
6,021,811	-		QEN71_RS27000	0.64	+2.2
6,021,811	-		QEN71_RS27000	0.64	-0.0
6,021,811	-		QEN71_RS27000	0.64	-0.8
6,021,811	-		QEN71_RS27000	0.64	-0.2
6,021,811	-		QEN71_RS27000	0.64	-0.9
6,021,811	-		QEN71_RS27000	0.64	-1.4
6,021,811	-		QEN71_RS27000	0.64	-0.5
6,021,811	-		QEN71_RS27000	0.64	+1.1
6,021,811	-		QEN71_RS27000	0.64	+0.6
6,021,852	+		QEN71_RS27000	0.70	+1.6
6,021,852	+		QEN71_RS27000	0.70	-0.7
6,021,852	+		QEN71_RS27000	0.70	+2.8
6,021,852	+		QEN71_RS27000	0.70	-1.1
6,021,852	+		QEN71_RS27000	0.70	+0.6
6,021,852	+		QEN71_RS27000	0.70	+0.0
6,021,852	+		QEN71_RS27000	0.70	-0.2
6,021,873	+		QEN71_RS27000	0.73	-1.2
6,021,873	+		QEN71_RS27000	0.73	+4.1
6,021,874	-		QEN71_RS27000	0.73	+0.4
6,021,904	+		QEN71_RS27000	0.77	+3.2
6,021,905	-		QEN71_RS27000	0.77	+1.7
6,021,905	-		QEN71_RS27000	0.77	+0.4
6,021,927	+		QEN71_RS27000	0.80	-0.2
6,021,927	+		QEN71_RS27000	0.80	+1.8
6,021,927	+		QEN71_RS27000	0.80	-0.1
6,021,927	+		QEN71_RS27000	0.80	+1.4
6,021,927	+		QEN71_RS27000	0.80	+2.6
6,021,927	+		QEN71_RS27000	0.80	+1.1
6,021,927	+		QEN71_RS27000	0.80	+1.8
6,021,927	+		QEN71_RS27000	0.80	-1.5
6,021,928	-		QEN71_RS27000	0.81	-0.2
6,021,928	-		QEN71_RS27000	0.81	+0.4
6,021,928	-		QEN71_RS27000	0.81	-0.7
6,021,928	-		QEN71_RS27000	0.81	+0.4
6,021,928	-		QEN71_RS27000	0.81	+0.6
6,021,931	+		QEN71_RS27000	0.81	+2.5
6,021,931	+		QEN71_RS27000	0.81	-1.3
6,021,931	+		QEN71_RS27000	0.81	+0.7
6,021,931	+		QEN71_RS27000	0.81	+0.6
6,021,931	+		QEN71_RS27000	0.81	-1.2
6,021,931	+		QEN71_RS27000	0.81	-0.7
6,021,931	+		QEN71_RS27000	0.81	+0.9
6,021,931	+		QEN71_RS27000	0.81	-0.9
6,021,931	+		QEN71_RS27000	0.81	-0.9
6,021,931	+		QEN71_RS27000	0.81	+3.3
6,021,931	+		QEN71_RS27000	0.81	+2.3
6,021,931	+		QEN71_RS27000	0.81	+0.1
6,021,931	+		QEN71_RS27000	0.81	+1.1
6,021,931	+		QEN71_RS27000	0.81	+0.8
6,021,932	-		QEN71_RS27000	0.81	+0.5
6,021,932	-		QEN71_RS27000	0.81	+1.5
6,021,932	-		QEN71_RS27000	0.81	-0.7
6,021,932	-		QEN71_RS27000	0.81	-1.0
6,021,932	-		QEN71_RS27000	0.81	+0.5
6,021,932	-		QEN71_RS27000	0.81	+1.3
6,021,932	-		QEN71_RS27000	0.81	+0.7
6,021,932	-		QEN71_RS27000	0.81	-2.0
6,021,932	-		QEN71_RS27000	0.81	-1.5
6,021,932	-		QEN71_RS27000	0.81	+1.7
6,021,932	-		QEN71_RS27000	0.81	+1.7
6,021,932	-		QEN71_RS27000	0.81	+0.2
6,021,932	-		QEN71_RS27000	0.81	+0.2
6,021,932	-		QEN71_RS27000	0.81	-0.8
6,021,932	-		QEN71_RS27000	0.81	-0.9
6,021,963	+		QEN71_RS27000	0.86	+0.6
6,021,963	+		QEN71_RS27000	0.86	+2.8
6,021,997	-				+1.3
6,022,015	-				-1.9
6,022,039	+				+0.1
6,022,040	-				+0.9
6,022,040	-				+0.2
6,022,040	-				+0.5
6,022,040	-				+0.9
6,022,040	-				+0.9