Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS23080

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
5,128,710	+		QEN71_RS23075	0.39	-0.9
5,128,710	+		QEN71_RS23075	0.39	-1.0
5,128,710	+		QEN71_RS23075	0.39	+0.9
5,128,710	+		QEN71_RS23075	0.39	-0.7
5,128,710	+		QEN71_RS23075	0.39	-0.8
5,128,711	-		QEN71_RS23075	0.39	-0.9
5,128,711	-		QEN71_RS23075	0.39	-0.7
5,128,890	+		QEN71_RS23075	0.51	+0.8
5,128,890	+		QEN71_RS23075	0.51	+1.2
5,129,271	+		QEN71_RS23075	0.76	-2.2
5,129,271	+		QEN71_RS23075	0.76	+0.3
5,129,272	-		QEN71_RS23075	0.76	+0.5
5,129,272	-		QEN71_RS23075	0.76	-2.8
5,129,272	-		QEN71_RS23075	0.76	-1.0
5,129,388	+		QEN71_RS23075	0.84	+1.5
5,129,388	+		QEN71_RS23075	0.84	-0.1
5,129,388	+		QEN71_RS23075	0.84	+1.2
5,129,389	-		QEN71_RS23075	0.84	+0.1
5,129,389	-		QEN71_RS23075	0.84	-0.3
5,129,389	-		QEN71_RS23075	0.84	-1.0
5,129,389	-		QEN71_RS23075	0.84	+0.7
5,129,389	-		QEN71_RS23075	0.84	-0.7
5,129,410	-		QEN71_RS23075	0.86	-0.9
5,129,410	-		QEN71_RS23075	0.86	-0.5
5,129,662	-				+0.8
5,129,668	+				+0.7
5,129,669	-				-2.7
5,129,692	+				-1.8
5,129,692	+				-0.1
5,129,692	+				+0.3
5,129,692	+				-1.0
5,129,692	+				-0.4
5,129,692	+				-1.0
5,129,692	+				+0.6
5,129,692	+				+0.2
5,129,693	-				-0.1
5,129,693	-				+1.3
5,129,693	-				-0.5
5,129,693	-				+0.4
5,129,693	-				+0.7
5,129,693	-				-0.3
5,129,693	-				-0.7
5,129,693	-				-1.9
5,129,693	-				-0.8
5,129,693	-				-1.0
5,129,811	+				+0.7
5,129,811	+				+0.5
5,129,811	+				-0.4
5,129,812	-				+1.1
5,129,812	-				+0.3
5,129,812	-				+0.2
5,129,814	+				+1.5
5,129,814	+				-0.1
5,129,814	+				+0.1
5,129,814	+				-3.2
5,129,814	+				+0.3
5,129,814	+				-0.1
5,129,814	+				-0.0
5,129,815	-				-0.0
5,129,815	-				+0.7
5,129,815	-				-0.5
5,129,815	-				+0.4
5,129,815	-				+0.6
5,129,856	+		QEN71_RS23080	0.13	-1.1
5,129,856	+		QEN71_RS23080	0.13	-2.2
5,129,856	+		QEN71_RS23080	0.13	+1.1
5,129,856	+		QEN71_RS23080	0.13	-0.3
5,129,856	+		QEN71_RS23080	0.13	+0.1
5,129,856	+		QEN71_RS23080	0.13	-0.4
5,129,856	+		QEN71_RS23080	0.13	-0.5
5,129,857	-		QEN71_RS23080	0.13	+0.9
5,129,857	-		QEN71_RS23080	0.13	-0.6
5,129,857	-		QEN71_RS23080	0.13	-1.0
5,129,857	-		QEN71_RS23080	0.13	+1.4
5,129,857	-		QEN71_RS23080	0.13	-1.3
5,129,857	-		QEN71_RS23080	0.13	-1.9
5,129,857	-		QEN71_RS23080	0.13	-0.4
5,129,857	-		QEN71_RS23080	0.13	+0.0
5,129,857	-		QEN71_RS23080	0.13	-0.1
5,129,857	-		QEN71_RS23080	0.13	+0.3
5,129,939	-		QEN71_RS23080	0.20	-0.6
5,130,045	+		QEN71_RS23080	0.29	-1.1
5,130,045	+		QEN71_RS23080	0.29	-0.2
5,130,045	+		QEN71_RS23080	0.29	-0.9
5,130,046	-		QEN71_RS23080	0.29	-1.0
5,130,063	+		QEN71_RS23080	0.30	-1.3
5,130,063	+		QEN71_RS23080	0.30	-1.8
5,130,064	-		QEN71_RS23080	0.30	-0.3
5,130,128	+		QEN71_RS23080	0.35	-0.6
5,130,128	+		QEN71_RS23080	0.35	-0.0
5,130,128	+		QEN71_RS23080	0.35	+1.4
5,130,128	+		QEN71_RS23080	0.35	+2.0
5,130,128	+		QEN71_RS23080	0.35	-1.4
5,130,129	-		QEN71_RS23080	0.35	-0.0
5,130,129	-		QEN71_RS23080	0.35	-3.8
5,130,318	+		QEN71_RS23080	0.51	+1.6
5,130,318	+		QEN71_RS23080	0.51	+0.7
5,130,319	-		QEN71_RS23080	0.51	-1.5
5,130,319	-		QEN71_RS23080	0.51	-1.7
5,130,363	+		QEN71_RS23080	0.55	-2.3
5,130,363	+		QEN71_RS23080	0.55	-0.5
5,130,363	+		QEN71_RS23080	0.55	-0.1
5,130,364	-		QEN71_RS23080	0.55	+0.3
5,130,364	-		QEN71_RS23080	0.55	-1.6
5,130,364	-		QEN71_RS23080	0.55	-0.5
5,130,485	+		QEN71_RS23080	0.65	+0.4
5,130,485	+		QEN71_RS23080	0.65	+0.0
5,130,485	+		QEN71_RS23080	0.65	-3.3
5,130,485	+		QEN71_RS23080	0.65	-1.4
5,130,485	+		QEN71_RS23080	0.65	-0.7
5,130,485	+		QEN71_RS23080	0.65	-1.2
5,130,485	+		QEN71_RS23080	0.65	+0.1
5,130,485	+		QEN71_RS23080	0.65	-0.3
5,130,485	+		QEN71_RS23080	0.65	-0.3
5,130,485	+		QEN71_RS23080	0.65	+0.0
5,130,486	-		QEN71_RS23080	0.65	-2.4
5,130,486	-		QEN71_RS23080	0.65	-0.9
5,130,486	-		QEN71_RS23080	0.65	-2.0
5,130,486	-		QEN71_RS23080	0.65	-0.3
5,130,486	-		QEN71_RS23080	0.65	-0.1
5,130,486	-		QEN71_RS23080	0.65	+0.8
5,130,486	-		QEN71_RS23080	0.65	-2.2
5,130,486	-		QEN71_RS23080	0.65	+0.7
5,130,486	-		QEN71_RS23080	0.65	-0.8
5,130,492	-		QEN71_RS23080	0.65	+0.6
5,130,492	-		QEN71_RS23080	0.65	-0.4
5,130,525	+		QEN71_RS23080	0.68	-0.2
5,130,525	+		QEN71_RS23080	0.68	-0.3
5,130,525	+		QEN71_RS23080	0.68	-0.1
5,130,526	-		QEN71_RS23080	0.68	-0.4
5,130,526	-		QEN71_RS23080	0.68	-0.4
5,130,526	-		QEN71_RS23080	0.68	-1.5
5,130,526	-		QEN71_RS23080	0.68	+1.7
5,130,526	-		QEN71_RS23080	0.68	+0.2
5,130,543	+		QEN71_RS23080	0.69	-1.4
5,130,543	+		QEN71_RS23080	0.69	-3.6
5,130,543	+		QEN71_RS23080	0.69	-1.7
5,130,543	+		QEN71_RS23080	0.69	-0.8
5,130,544	-		QEN71_RS23080	0.69	+0.1
5,130,544	-		QEN71_RS23080	0.69	-1.8
5,130,544	-		QEN71_RS23080	0.69	-1.1
5,130,544	-		QEN71_RS23080	0.69	-0.4
5,130,620	+		QEN71_RS23080	0.76	-0.3
5,130,620	+		QEN71_RS23080	0.76	-1.7
5,130,620	+		QEN71_RS23080	0.76	-0.1
5,130,621	-		QEN71_RS23080	0.76	-0.1
5,130,657	-		QEN71_RS23080	0.79	-0.1
5,130,778	-		QEN71_RS23080	0.89	+0.7
5,130,801	+				-0.7
5,130,801	+				+0.2
5,130,801	+				+0.1
5,130,802	-				-0.3
5,130,802	-				+0.1
5,130,802	-				+0.3
5,130,802	-				-0.3
5,130,915	+				+1.7
5,130,915	+				-0.1
5,130,915	+				-0.6
5,130,915	+				+2.1
5,130,916	-				+0.1
5,130,916	-				+0.9
5,130,935	-				+0.1
5,130,951	+				+0.7
5,130,951	+				-2.4
5,130,951	+				-1.9
5,130,951	+				+1.4
5,130,951	+				-0.9
5,130,951	+				-0.1
5,130,951	+				-1.3
5,130,951	+				-1.7
5,130,951	+				-1.1
5,130,951	+				-0.2
5,130,951	+				-0.4
5,130,951	+				-1.1
5,130,951	+				-1.3
5,130,952	-				-0.1
5,130,952	-				-2.5
5,130,952	-				+0.4
5,130,952	-				+0.6
5,130,952	-				-0.7
5,130,952	-				-1.1
5,131,021	+				-1.2
5,131,021	+				-0.5
5,131,021	+				-0.3
5,131,021	+				-0.9
5,131,021	+				-0.1
5,131,021	+				-0.2
5,131,022	-				-0.4
5,131,022	-				+0.9
5,131,231	+		QEN71_RS23085	0.18	-0.3
5,131,231	+		QEN71_RS23085	0.18	-0.2
5,131,231	+		QEN71_RS23085	0.18	+1.8
5,131,231	+		QEN71_RS23085	0.18	+0.3
5,131,231	+		QEN71_RS23085	0.18	+0.1
5,131,232	-		QEN71_RS23085	0.18	-0.5
5,131,232	-		QEN71_RS23085	0.18	-0.5
5,131,232	-		QEN71_RS23085	0.18	-0.1
5,131,362	+		QEN71_RS23085	0.26	+0.1
5,131,362	+		QEN71_RS23085	0.26	+2.4
5,131,486	-		QEN71_RS23085	0.34	+0.3
5,131,486	-		QEN71_RS23085	0.34	+0.2
5,131,559	+		QEN71_RS23085	0.39	+1.6
5,131,560	-		QEN71_RS23085	0.39	-0.1
5,131,577	+		QEN71_RS23085	0.40	+0.6
5,131,577	+		QEN71_RS23085	0.40	+0.9
5,131,597	+		QEN71_RS23085	0.41	-0.7
5,131,597	+		QEN71_RS23085	0.41	+1.8
5,131,597	+		QEN71_RS23085	0.41	-0.7
5,131,598	-		QEN71_RS23085	0.41	-0.4
5,131,598	-		QEN71_RS23085	0.41	-1.9
5,131,598	-		QEN71_RS23085	0.41	-2.4
5,131,598	-		QEN71_RS23085	0.41	+0.2
5,131,598	-		QEN71_RS23085	0.41	+0.2
5,131,598	-		QEN71_RS23085	0.41	-0.4
5,131,598	-		QEN71_RS23085	0.41	-0.3
5,131,601	+		QEN71_RS23085	0.41	-0.7
5,131,601	+		QEN71_RS23085	0.41	-0.3
5,131,601	+		QEN71_RS23085	0.41	+0.6
5,131,601	+		QEN71_RS23085	0.41	-0.5
5,131,601	+		QEN71_RS23085	0.41	+0.8
5,131,602	-		QEN71_RS23085	0.41	+1.3
5,131,602	-		QEN71_RS23085	0.41	+0.1
5,131,602	-		QEN71_RS23085	0.41	+0.6
5,131,776	-		QEN71_RS23085	0.52	+1.7
5,131,813	-		QEN71_RS23085	0.55	+0.4
5,131,821	+		QEN71_RS23085	0.55	-0.9
5,131,822	-		QEN71_RS23085	0.55	+0.2
5,131,822	-		QEN71_RS23085	0.55	-1.3
5,131,822	-		QEN71_RS23085	0.55	-1.0
5,131,822	-		QEN71_RS23085	0.55	+0.2
5,131,822	-		QEN71_RS23085	0.55	+1.9
5,131,822	-		QEN71_RS23085	0.55	+0.3
5,131,872	+		QEN71_RS23085	0.59	+0.3