Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS07945

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
1,759,604	+				-0.4
1,759,604	+				+0.3
1,759,604	+				+0.3
1,759,604	+				+0.4
1,759,605	-				-0.6
1,759,605	-				-0.6
1,759,651	+				-0.0
1,759,652	-				-0.3
1,759,739	+				+0.2
1,759,739	+				+0.8
1,759,739	+				+0.1
1,759,739	+				-0.4
1,759,739	+				-0.7
1,759,740	-				-0.7
1,759,740	-				-1.2
1,759,740	-				-1.4
1,759,740	-				+1.2
1,759,740	-				+0.4
1,759,740	-				-0.7
1,759,740	-				-0.1
1,759,740	-				-0.6
1,759,740	-				-0.0
1,759,878	+				+0.8
1,759,878	+				-0.7
1,759,878	+				-1.4
1,759,878	+				+0.5
1,759,878	+				-1.2
1,759,878	+				+0.4
1,759,878	+				+1.5
1,759,878	+				-0.8
1,759,878	+				-0.2
1,759,878	+				-1.4
1,759,879	-				+0.9
1,759,879	-				+0.4
1,759,879	-				+0.4
1,759,917	-				-1.1
1,759,928	+				+0.0
1,759,928	+				+0.2
1,759,928	+				-0.0
1,759,928	+				-0.7
1,759,928	+				+0.2
1,759,928	+				+0.3
1,759,928	+				-0.1
1,759,929	-				-1.2
1,759,929	-				-0.2
1,759,929	-				-2.4
1,759,977	+				-0.9
1,759,977	+				-0.7
1,759,977	+				+0.3
1,759,978	-				+0.8
1,759,978	-				+0.3
1,759,989	+				-0.7
1,759,989	+				+0.1
1,759,990	-				+2.0
1,759,990	-				-0.3
1,759,990	-				-2.0
1,759,990	-				-0.6
1,759,990	-				-0.5
1,759,990	-				+1.3
1,760,015	-				+0.8
1,760,033	+				+0.1
1,760,033	+				-0.7
1,760,033	+				+1.3
1,760,033	+				+1.6
1,760,033	+				-1.4
1,760,033	+				-0.1
1,760,034	-				-0.7
1,760,034	-				-0.7
1,760,034	-				-0.8
1,760,053	+		QEN71_RS07940	0.12	+0.5
1,760,053	+		QEN71_RS07940	0.12	+0.3
1,760,053	+		QEN71_RS07940	0.12	-1.8
1,760,054	-		QEN71_RS07940	0.13	-0.2
1,760,054	-		QEN71_RS07940	0.13	+0.9
1,760,054	-		QEN71_RS07940	0.13	-0.0
1,760,054	-		QEN71_RS07940	0.13	+1.7
1,760,054	-		QEN71_RS07940	0.13	-1.7
1,760,250	+		QEN71_RS07940	0.55	+1.0
1,760,251	-		QEN71_RS07940	0.55	-0.2
1,760,251	-		QEN71_RS07940	0.55	+1.7
1,760,251	-		QEN71_RS07940	0.55	-0.8
1,760,431	+				+0.9
1,760,432	-				+3.7
1,760,772	+		QEN71_RS07945	0.47	+1.4
1,760,772	+		QEN71_RS07945	0.47	-0.6
1,760,773	-		QEN71_RS07945	0.47	+1.1
1,760,773	-		QEN71_RS07945	0.47	+0.7
1,760,829	+		QEN71_RS07945	0.56	-0.4
1,760,829	+		QEN71_RS07945	0.56	+0.4
1,760,830	-		QEN71_RS07945	0.57	+0.7
1,760,830	-		QEN71_RS07945	0.57	-0.0
1,760,830	-		QEN71_RS07945	0.57	-0.4
1,760,830	-		QEN71_RS07945	0.57	-1.5
1,760,916	+		QEN71_RS07945	0.71	+1.5
1,760,917	-		QEN71_RS07945	0.71	+1.0
1,760,917	-		QEN71_RS07945	0.71	-0.0
1,760,917	-		QEN71_RS07945	0.71	+0.7
1,760,917	-		QEN71_RS07945	0.71	-1.2
1,761,091	+				-1.7
1,761,091	+				-0.6
1,761,091	+				+0.4
1,761,092	-				+2.7
1,761,092	-				-0.6
1,761,092	-				-2.1
1,761,092	-				-0.0
1,761,092	-				-0.1
1,761,092	-				-1.0
1,761,093	+				-0.0
1,761,093	+				-0.4
1,761,093	+				+0.2
1,761,093	+				-0.8
1,761,093	+				-1.0
1,761,094	-				+0.6
1,761,094	-				+1.0
1,761,094	-				+0.2
1,761,094	-				-0.6
1,761,094	-				+0.8
1,761,113	+				-0.2
1,761,195	+				+0.9
1,761,195	+				+0.8
1,761,196	-				-3.4
1,761,196	-				-0.2
1,761,216	+		QEN71_RS07950	0.13	-1.5
1,761,235	+		QEN71_RS07950	0.16	-0.6
1,761,235	+		QEN71_RS07950	0.16	-0.8
1,761,235	+		QEN71_RS07950	0.16	+0.5
1,761,236	-		QEN71_RS07950	0.16	+0.4
1,761,236	-		QEN71_RS07950	0.16	-0.0
1,761,236	-		QEN71_RS07950	0.16	+0.5
1,761,303	+		QEN71_RS07950	0.26	+0.3
1,761,303	+		QEN71_RS07950	0.26	+0.2
1,761,303	+		QEN71_RS07950	0.26	-1.2
1,761,303	+		QEN71_RS07950	0.26	+0.3
1,761,303	+		QEN71_RS07950	0.26	+1.2
1,761,303	+		QEN71_RS07950	0.26	-1.5
1,761,304	-		QEN71_RS07950	0.27	+0.3
1,761,304	-		QEN71_RS07950	0.27	+0.2
1,761,304	-		QEN71_RS07950	0.27	-0.4
1,761,304	-		QEN71_RS07950	0.27	-0.4
1,761,304	-		QEN71_RS07950	0.27	+0.4
1,761,304	-		QEN71_RS07950	0.27	+0.1
1,761,339	+		QEN71_RS07950	0.32	-0.2
1,761,531	+		QEN71_RS07950	0.63	-0.4
1,761,531	+		QEN71_RS07950	0.63	+0.3
1,761,531	+		QEN71_RS07950	0.63	-1.5
1,761,531	+		QEN71_RS07950	0.63	-2.0
1,761,531	+		QEN71_RS07950	0.63	+2.4
1,761,531	+		QEN71_RS07950	0.63	+0.1
1,761,532	-		QEN71_RS07950	0.63	-2.0
1,761,532	-		QEN71_RS07950	0.63	+0.2
1,761,532	-		QEN71_RS07950	0.63	-0.4
1,761,684	+		QEN71_RS07950	0.87	-2.0
1,761,685	-		QEN71_RS07950	0.87	+1.5
1,761,685	-		QEN71_RS07950	0.87	+0.3
1,761,685	-		QEN71_RS07950	0.87	-0.0
1,761,685	-		QEN71_RS07950	0.87	+0.6
1,761,685	-		QEN71_RS07950	0.87	+0.1
1,761,747	+				+0.8
1,761,747	+				-0.2
1,761,747	+				-0.5
1,761,747	+				+1.5
1,761,747	+				-1.8
1,761,747	+				-0.0
1,761,748	-				+0.2
1,761,790	+				-0.4
1,761,790	+				-0.2
1,761,790	+				+0.9
1,761,790	+				-1.6
1,761,790	+				-2.6
1,761,790	+				-0.6
1,761,790	+				-0.3
1,761,790	+				+0.4
1,761,791	-				+0.0
1,761,791	-				+0.9
1,761,791	-				-3.1
1,761,791	-				-3.2
1,761,791	-				-0.9
1,761,791	-				-0.4
1,761,791	-				+0.4
1,761,791	-				-0.1
1,761,791	-				-1.1
1,761,791	-				-0.1
1,761,791	-				-0.4
1,761,791	-				-0.9
1,761,791	-				-0.3
1,761,791	-				+0.7
1,761,791	-				+0.4
1,761,826	+				-1.5
1,761,826	+				+1.1
1,761,827	-				+1.2
1,761,893	-		QEN71_RS07955	0.20	+1.4
1,762,019	+		QEN71_RS07955	0.40	-0.9