Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS07330

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
1,626,939	+		QEN71_RS07320	0.77	-1.1
1,626,939	+		QEN71_RS07320	0.77	-0.6
1,626,939	+		QEN71_RS07320	0.77	-2.9
1,626,939	+		QEN71_RS07320	0.77	+1.0
1,626,939	+		QEN71_RS07320	0.77	+0.3
1,626,940	-		QEN71_RS07320	0.78	-0.0
1,626,940	-		QEN71_RS07320	0.78	-0.8
1,626,940	-		QEN71_RS07320	0.78	+1.0
1,626,940	-		QEN71_RS07320	0.78	+0.9
1,626,940	-		QEN71_RS07320	0.78	-0.8
1,626,940	-		QEN71_RS07320	0.78	-0.1
1,626,940	-		QEN71_RS07320	0.78	-0.1
1,626,940	-		QEN71_RS07320	0.78	-1.7
1,626,940	-		QEN71_RS07320	0.78	+0.4
1,627,049	+				-0.7
1,627,096	+				-0.1
1,627,096	+				-0.3
1,627,097	-				-0.5
1,627,126	+				-0.5
1,627,126	+				-1.1
1,627,126	+				+0.8
1,627,126	+				+0.5
1,627,126	+				-0.9
1,627,127	-				+0.2
1,627,127	-				+1.4
1,627,155	+				-1.1
1,627,156	-				-0.6
1,627,163	-				-3.4
1,627,271	+		QEN71_RS07325	0.34	-1.1
1,627,272	-		QEN71_RS07325	0.34	-0.4
1,627,272	-		QEN71_RS07325	0.34	-1.0
1,627,273	+		QEN71_RS07325	0.34	-0.2
1,627,273	+		QEN71_RS07325	0.34	+1.0
1,627,274	-		QEN71_RS07325	0.34	+1.7
1,627,274	-		QEN71_RS07325	0.34	+1.4
1,627,274	-		QEN71_RS07325	0.34	-0.5
1,627,274	-		QEN71_RS07325	0.34	+0.2
1,627,274	-		QEN71_RS07325	0.34	-0.5
1,627,361	+		QEN71_RS07325	0.53	+0.4
1,627,361	+		QEN71_RS07325	0.53	-0.5
1,627,361	+		QEN71_RS07325	0.53	-0.2
1,627,361	+		QEN71_RS07325	0.53	-1.2
1,627,361	+		QEN71_RS07325	0.53	-0.1
1,627,361	+		QEN71_RS07325	0.53	+0.1
1,627,361	+		QEN71_RS07325	0.53	+1.0
1,627,362	-		QEN71_RS07325	0.54	-0.6
1,627,362	-		QEN71_RS07325	0.54	+0.6
1,627,362	-		QEN71_RS07325	0.54	-2.1
1,627,362	-		QEN71_RS07325	0.54	-0.4
1,627,362	-		QEN71_RS07325	0.54	+0.6
1,627,362	-		QEN71_RS07325	0.54	-0.8
1,627,362	-		QEN71_RS07325	0.54	-1.5
1,627,362	-		QEN71_RS07325	0.54	+0.3
1,627,505	+		QEN71_RS07325	0.85	+1.2
1,627,506	-		QEN71_RS07325	0.85	-0.3
1,627,571	+				+1.3
1,627,572	-				-0.2
1,627,572	-				-0.3
1,627,572	-				-0.5
1,627,572	-				-0.7
1,627,572	-				-0.0
1,627,613	+				+1.4
1,627,613	+				-0.7
1,627,613	+				+0.2
1,627,614	-				-0.7
1,627,614	-				-0.4
1,627,614	-				-2.4
1,627,631	+				-0.4
1,627,631	+				+0.4
1,627,631	+				-0.8
1,627,632	-				+0.5
1,627,632	-				+0.4
1,627,632	-				+0.5
1,627,632	-				+0.2
1,627,690	+				+0.3
1,627,690	+				-1.1
1,627,690	+				+1.2
1,627,690	+				+0.4
1,627,690	+				-1.2
1,627,690	+				-2.0
1,627,691	-				+1.1
1,627,691	-				+0.6
1,627,691	-				+0.4
1,627,691	-				+1.2
1,627,691	-				-0.1
1,627,691	-				+1.2
1,627,691	-				-1.3
1,627,691	-				+0.1
1,627,691	-				+0.3
1,627,709	+				+1.1
1,627,709	+				-0.1
1,627,710	-				+0.8
1,627,720	-				-1.1
1,627,748	+				+1.8
1,627,748	+				-1.5
1,627,748	+				-0.2
1,627,748	+				+0.2
1,627,749	-				+1.7
1,627,749	-				+0.0
1,627,749	-				-1.3
1,627,829	+				-0.0
1,627,829	+				+0.9
1,627,829	+				+0.5
1,627,829	+				-0.9
1,627,829	+				-0.8
1,627,829	+				-0.8
1,627,830	-				-0.8
1,627,830	-				-1.0
1,627,830	-				-3.5
1,627,830	-				-1.5
1,627,830	-				-0.4
1,627,830	-				-0.4
1,627,830	-				-2.1
1,627,830	-				+0.8
1,627,830	-				-0.8
1,627,830	-				+0.6
1,627,976	+		QEN71_RS07330	0.22	-1.5
1,628,072	+		QEN71_RS07330	0.32	-0.3
1,628,072	+		QEN71_RS07330	0.32	+0.0
1,628,072	+		QEN71_RS07330	0.32	-0.8
1,628,073	-		QEN71_RS07330	0.32	+0.5
1,628,073	-		QEN71_RS07330	0.32	+0.2
1,628,073	-		QEN71_RS07330	0.32	+0.2
1,628,073	-		QEN71_RS07330	0.32	-1.0
1,628,177	+		QEN71_RS07330	0.43	-1.2
1,628,177	+		QEN71_RS07330	0.43	+0.7
1,628,177	+		QEN71_RS07330	0.43	+2.4
1,628,177	+		QEN71_RS07330	0.43	+1.0
1,628,177	+		QEN71_RS07330	0.43	+0.2
1,628,178	-		QEN71_RS07330	0.43	-1.9
1,628,178	-		QEN71_RS07330	0.43	+0.3
1,628,178	-		QEN71_RS07330	0.43	-0.9
1,628,178	-		QEN71_RS07330	0.43	-1.6
1,628,208	-		QEN71_RS07330	0.46	-1.1
1,628,312	+		QEN71_RS07330	0.57	+0.1
1,628,312	+		QEN71_RS07330	0.57	-2.2
1,628,313	-		QEN71_RS07330	0.57	+0.4
1,628,426	+		QEN71_RS07330	0.68	+0.4
1,628,427	-		QEN71_RS07330	0.69	-1.2
1,628,427	-		QEN71_RS07330	0.69	-1.0
1,628,427	-		QEN71_RS07330	0.69	-0.2
1,628,441	+		QEN71_RS07330	0.70	+0.4
1,628,441	+		QEN71_RS07330	0.70	-0.3
1,628,441	+		QEN71_RS07330	0.70	-0.8
1,628,441	+		QEN71_RS07330	0.70	-1.6
1,628,442	-		QEN71_RS07330	0.70	+1.6
1,628,442	-		QEN71_RS07330	0.70	+0.3
1,628,442	-		QEN71_RS07330	0.70	-0.0
1,628,442	-		QEN71_RS07330	0.70	-0.8
1,628,467	+		QEN71_RS07330	0.73	-0.6
1,628,467	+		QEN71_RS07330	0.73	+1.1
1,628,467	+		QEN71_RS07330	0.73	-0.3
1,628,468	-		QEN71_RS07330	0.73	-1.0
1,628,609	+		QEN71_RS07330	0.87	-0.5
1,628,609	+		QEN71_RS07330	0.87	+0.6
1,628,609	+		QEN71_RS07330	0.87	-1.5
1,628,609	+		QEN71_RS07330	0.87	+2.3
1,628,610	-		QEN71_RS07330	0.87	+1.5
1,628,610	-		QEN71_RS07330	0.87	-0.6
1,628,651	+				+0.1
1,628,652	-				-0.0
1,628,652	-				+0.1
1,628,652	-				-0.3
1,628,652	-				+0.7
1,628,703	-				-0.3
1,628,703	-				-0.0
1,628,733	-				+0.4
1,628,733	-				-0.6
1,628,852	+				-0.2
1,628,852	+				-1.7
1,628,852	+				-0.5
1,628,852	+				+0.8
1,628,852	+				-0.5
1,628,852	+				-0.2
1,628,852	+				+0.5
1,628,852	+				+1.0
1,628,852	+				+0.2
1,628,852	+				+0.8
1,628,852	+				+0.2
1,628,852	+				+1.0
1,628,853	-				-1.2
1,628,853	-				+2.4
1,628,853	-				+1.6
1,628,853	-				-1.0
1,628,853	-				-0.1
1,628,853	-				-0.1
1,628,853	-				+1.0
1,628,853	-				+1.0
1,628,853	-				-1.0
1,628,853	-				-1.2
1,628,853	-				-0.3
1,628,853	-				+0.4
1,628,912	+				-1.8
1,628,912	+				+0.8
1,628,912	+				+0.3
1,628,912	+				-1.5
1,628,925	+				+0.4
1,628,925	+				+1.0
1,628,925	+				+0.1
1,628,925	+				-0.5
1,628,925	+				-1.6
1,628,925	+				+1.1
1,628,925	+				+1.0
1,628,925	+				-0.1
1,628,926	-				+0.0
1,628,926	-				-1.7
1,628,926	-				+0.7
1,628,926	-				-0.6
1,628,926	-				+0.6
1,628,945	+				+1.5
1,628,945	+				+1.1
1,628,945	+				+0.4
1,628,945	+				-0.1
1,628,946	-				+1.1
1,628,946	-				-1.2
1,628,946	-				+0.2
1,629,066	+				-0.8
1,629,067	-				+0.3
1,629,123	-				-0.7
1,629,298	+				+0.5
1,629,298	+				-0.3
1,629,298	+				-0.2
1,629,298	+				+0.7
1,629,298	+				-0.8
1,629,298	+				-0.2
1,629,298	+				+0.6
1,629,298	+				-0.0
1,629,298	+				+0.2
1,629,299	-				-1.7
1,629,299	-				+1.7
1,629,299	-				+0.2
1,629,478	+		QEN71_RS07335	0.18	-0.2
1,629,478	+		QEN71_RS07335	0.18	+1.6
1,629,478	+		QEN71_RS07335	0.18	-0.1
1,629,558	+		QEN71_RS07335	0.27	+0.7
1,629,629	+		QEN71_RS07335	0.34	-0.7