Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04143

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2
7,070	-		MIT1002_04141	0.28	+0.1
7,100	+		MIT1002_04141	0.33	+1.3
7,102	-		MIT1002_04141	0.33	-1.0
7,102	-		MIT1002_04141	0.33	+0.8
7,103	-		MIT1002_04141	0.33	+0.3
7,186	+		MIT1002_04141	0.46	+0.8
7,231	-		MIT1002_04141	0.53	-0.2
7,231	-		MIT1002_04141	0.53	+0.0
7,256	+		MIT1002_04141	0.57	+0.2
7,262	-		MIT1002_04141	0.58	-1.1
7,288	-		MIT1002_04141	0.62	-0.2
7,331	-		MIT1002_04141	0.69	+0.5
7,422	+		MIT1002_04141	0.83	-0.6
7,473	+				+0.0
7,534	-				+0.7
7,639	-		MIT1002_04142	0.42	+0.5
7,725	+		MIT1002_04142	0.75	+0.5
7,727	+		MIT1002_04142	0.76	+1.3
7,733	-		MIT1002_04142	0.78	+0.5
7,733	-		MIT1002_04142	0.78	-2.0
7,735	-		MIT1002_04142	0.79	-2.0
7,745	+		MIT1002_04142	0.83	-0.0
7,745	+		MIT1002_04142	0.83	-0.0
7,745	+		MIT1002_04142	0.83	+0.5
7,753	-		MIT1002_04142	0.86	+0.7
7,753	-		MIT1002_04142	0.86	-0.0
7,753	-		MIT1002_04142	0.86	+0.9
7,753	-		MIT1002_04142	0.86	+1.4
7,771	-				+0.2
7,775	+				-0.6
7,892	-				-1.4
7,905	+				-0.5
7,905	+				+0.7
7,905	+				+0.3
7,906	-				-0.2
7,913	-				+0.8
7,913	-				+0.2
7,913	-				-0.2
7,913	-				+1.6
7,913	-				+0.1
7,929	-				+1.1
7,964	+				-0.3
7,964	+				-0.2
7,976	+				+0.6
7,976	+				+0.7
8,013	-				-0.1
8,037	+				+0.4
8,067	-				-0.4
8,071	+				+0.3
8,071	+				-0.1
8,095	+				-0.1
8,114	+				-1.3
8,137	+		MIT1002_04143	0.11	-0.9
8,183	-		MIT1002_04143	0.16	-0.1
8,222	+		MIT1002_04143	0.20	-1.2
8,223	-		MIT1002_04143	0.20	+0.4
8,228	-		MIT1002_04143	0.21	-0.2
8,240	+		MIT1002_04143	0.22	+0.6
8,270	+		MIT1002_04143	0.25	-0.4
8,280	+		MIT1002_04143	0.26	-1.3
8,288	-		MIT1002_04143	0.27	-0.2
8,295	-		MIT1002_04143	0.28	+0.3
8,313	+		MIT1002_04143	0.30	-0.7
8,360	+		MIT1002_04143	0.35	+1.6
8,360	+		MIT1002_04143	0.35	-1.2
8,368	-		MIT1002_04143	0.36	-0.9
8,422	+		MIT1002_04143	0.41	-0.0
8,422	+		MIT1002_04143	0.41	-0.6
8,430	-		MIT1002_04143	0.42	+0.4
8,430	-		MIT1002_04143	0.42	-0.7
8,440	+		MIT1002_04143	0.43	+0.1
8,704	+		MIT1002_04143	0.71	-3.8
8,758	-		MIT1002_04143	0.77	-0.8
8,786	-		MIT1002_04143	0.79	+0.5
8,791	+		MIT1002_04143	0.80	+0.2
8,799	+		MIT1002_04143	0.81	+0.3
8,799	+		MIT1002_04143	0.81	-0.3
8,799	+		MIT1002_04143	0.81	-1.0
8,799	+		MIT1002_04143	0.81	-0.8
8,807	-		MIT1002_04143	0.82	+0.3
8,807	-		MIT1002_04143	0.82	+0.8
8,807	-		MIT1002_04143	0.82	+0.6
8,807	-		MIT1002_04143	0.82	+0.7
8,807	-		MIT1002_04143	0.82	+0.2
8,807	-		MIT1002_04143	0.82	-0.2
8,814	+		MIT1002_04143	0.82	-0.0
8,857	+		MIT1002_04143	0.87	+0.1
8,865	-		MIT1002_04143	0.88	-0.6
8,865	-		MIT1002_04143	0.88	-0.0
8,865	-		MIT1002_04143	0.88	-0.2
8,894	+				+1.0
8,920	-				+1.0
8,920	-				-1.9
8,976	-				+0.1
9,037	-				-0.1
9,037	-				+0.6
9,114	+				-0.1
9,180	-				+0.9
9,221	+				+0.4
9,262	+				+0.5
9,262	+				-1.3
9,270	-				-1.1
9,275	-				-0.4
9,289	-				+1.1
9,311	+				+0.3
9,311	+				-0.4
9,311	+				+0.8
9,311	+				-0.9
9,311	+				+0.3
9,311	+				+0.3
9,311	+				-0.3
9,311	+				+0.9
9,311	+				-2.4
9,311	+				-0.0
9,319	-				+0.6
9,319	-				+0.2
9,319	-				+0.5
9,319	-				-0.6
9,319	-				-0.5
9,319	-				-0.3
9,319	-				+0.1
9,319	-				+0.1
9,319	-				+1.2
9,324	-				-0.6
9,340	-				+0.5
9,365	+				+0.2
9,365	+				-0.1
9,367	+				-0.6
9,368	-				-0.2
9,373	-				+1.0
9,373	-				+0.2
9,375	-				+0.5
9,408	-				-1.1
9,509	-				-0.4
9,511	+				+1.1
9,511	+				+0.1
9,627	-				-0.2
9,642	-				-3.0
9,689	+				-1.3
9,729	+		MIT1002_04144	0.20	-0.1
9,790	+		MIT1002_04144	0.38	-1.3
9,790	+		MIT1002_04144	0.38	+0.2
9,790	+		MIT1002_04144	0.38	+0.2
9,790	+		MIT1002_04144	0.38	-0.2
9,790	+		MIT1002_04144	0.38	-0.2
9,790	+		MIT1002_04144	0.38	-1.2
9,790	+		MIT1002_04144	0.38	+1.0
9,790	+		MIT1002_04144	0.38	+0.0
9,790	+		MIT1002_04144	0.38	+0.3
9,790	+		MIT1002_04144	0.38	+1.6
9,790	+		MIT1002_04144	0.38	+1.0
9,790	+		MIT1002_04144	0.38	+1.0
9,790	+		MIT1002_04144	0.38	-2.2
9,790	+		MIT1002_04144	0.38	+0.7
9,790	+		MIT1002_04144	0.38	-1.7
9,790	+		MIT1002_04144	0.38	-1.2
9,790	+		MIT1002_04144	0.38	-0.4
9,790	+		MIT1002_04144	0.38	-0.3
9,790	+		MIT1002_04144	0.38	-0.3
9,790	+		MIT1002_04144	0.38	-0.6
9,790	+		MIT1002_04144	0.38	+0.2
9,790	+		MIT1002_04144	0.38	-2.0
9,790	+		MIT1002_04144	0.38	-1.3
9,790	+		MIT1002_04144	0.38	-0.6
9,790	+		MIT1002_04144	0.38	-0.3
9,798	-		MIT1002_04144	0.41	+0.3
9,798	-		MIT1002_04144	0.41	-1.0
9,798	-		MIT1002_04144	0.41	+0.6
9,798	-		MIT1002_04144	0.41	+1.8
9,798	-		MIT1002_04144	0.41	-0.4
9,798	-		MIT1002_04144	0.41	+0.7
9,798	-		MIT1002_04144	0.41	+0.7
9,798	-		MIT1002_04144	0.41	-0.0
9,798	-		MIT1002_04144	0.41	-0.4
9,798	-		MIT1002_04144	0.41	+0.1
9,798	-		MIT1002_04144	0.41	+0.1
9,798	-		MIT1002_04144	0.41	+1.5
9,798	-		MIT1002_04144	0.41	-1.6
9,798	-		MIT1002_04144	0.41	-0.0
9,798	-		MIT1002_04144	0.41	-0.5
9,798	-		MIT1002_04144	0.41	-0.2
9,798	-		MIT1002_04144	0.41	-0.9
9,798	-		MIT1002_04144	0.41	-0.2
9,798	-		MIT1002_04144	0.41	-1.6
9,808	-		MIT1002_04144	0.44	+0.7
9,883	-		MIT1002_04144	0.66	+0.1
9,911	-		MIT1002_04144	0.75	+0.4
9,957	+		MIT1002_04144	0.89	+0.3
9,967	+				+1.0