Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03658

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2
4,091,294	-		MIT1002_03656	0.49	-1.0
4,091,378	+		MIT1002_03656	0.57	-0.7
4,091,412	-		MIT1002_03656	0.61	-0.4
4,091,469	-		MIT1002_03656	0.67	-1.2
4,091,505	+		MIT1002_03656	0.70	+0.5
4,091,505	+		MIT1002_03656	0.70	+0.0
4,091,513	-		MIT1002_03656	0.71	-0.2
4,091,513	-		MIT1002_03656	0.71	-1.8
4,091,513	-		MIT1002_03656	0.71	-0.4
4,091,525	-		MIT1002_03656	0.72	-0.9
4,091,530	-		MIT1002_03656	0.73	-0.0
4,091,530	-		MIT1002_03656	0.73	-1.6
4,091,575	-		MIT1002_03656	0.77	-1.0
4,091,603	-		MIT1002_03656	0.80	-0.7
4,091,603	-		MIT1002_03656	0.80	+0.2
4,091,603	-		MIT1002_03656	0.80	+1.5
4,091,603	-		MIT1002_03656	0.80	+0.1
4,091,603	-		MIT1002_03656	0.80	-1.7
4,091,603	-		MIT1002_03656	0.80	+0.6
4,091,610	+		MIT1002_03656	0.81	+2.1
4,091,642	+		MIT1002_03656	0.84	+0.2
4,091,650	-		MIT1002_03656	0.85	-0.6
4,091,650	-		MIT1002_03656	0.85	-0.4
4,091,651	+		MIT1002_03656	0.85	-0.3
4,091,653	+		MIT1002_03656	0.85	+0.8
4,091,682	-		MIT1002_03656	0.88	+0.1
4,091,682	-		MIT1002_03656	0.88	-1.1
4,091,718	-				+1.0
4,091,724	-				-2.8
4,091,724	-				+0.1
4,091,724	-				-0.3
4,091,724	-				-1.4
4,091,751	-				+0.3
4,091,753	+				-2.4
4,091,796	-				+0.0
4,091,804	-				+0.0
4,091,857	+				+1.7
4,091,874	-				-0.4
4,092,018	+		MIT1002_03657	0.24	-0.4
4,092,026	-		MIT1002_03657	0.27	-0.1
4,092,026	-		MIT1002_03657	0.27	-0.7
4,092,036	-		MIT1002_03657	0.30	+0.5
4,092,091	-		MIT1002_03657	0.46	-1.2
4,092,101	-		MIT1002_03657	0.49	-2.4
4,092,182	+		MIT1002_03657	0.72	-0.1
4,092,212	+		MIT1002_03657	0.81	-0.4
4,092,299	-				-3.4
4,092,299	-				-1.6
4,092,357	-		MIT1002_03658	0.16	-0.9
4,092,357	-		MIT1002_03658	0.16	-0.8
4,092,364	+		MIT1002_03658	0.18	-3.1
4,092,520	+		MIT1002_03658	0.53	-1.6
4,092,520	+		MIT1002_03658	0.53	-1.6
4,092,569	+		MIT1002_03658	0.64	-2.2
4,092,588	-		MIT1002_03658	0.68	-0.9
4,092,589	+		MIT1002_03658	0.68	-1.9
4,092,589	+		MIT1002_03658	0.68	-2.1
4,092,605	+		MIT1002_03658	0.72	+0.2
4,092,615	+		MIT1002_03658	0.74	-0.4
4,092,807	+				+0.3
4,092,815	-				-0.0
4,092,857	+				+0.1
4,092,885	-				-0.1
4,092,920	+				-0.1
4,092,920	+				-0.3
4,092,965	-		MIT1002_03659	0.11	-0.0
4,093,075	+		MIT1002_03659	0.19	-0.7
4,093,083	-		MIT1002_03659	0.19	+0.9
4,093,083	-		MIT1002_03659	0.19	-0.0
4,093,083	-		MIT1002_03659	0.19	-1.7
4,093,088	-		MIT1002_03659	0.20	-1.1
4,093,090	+		MIT1002_03659	0.20	-1.4
4,093,098	-		MIT1002_03659	0.21	-2.3
4,093,098	-		MIT1002_03659	0.21	+0.5
4,093,100	-		MIT1002_03659	0.21	+0.4
4,093,132	+		MIT1002_03659	0.23	-0.5
4,093,251	+		MIT1002_03659	0.32	+0.1
4,093,261	+		MIT1002_03659	0.33	-0.3
4,093,261	+		MIT1002_03659	0.33	-3.5
4,093,269	-		MIT1002_03659	0.33	+0.2
4,093,269	-		MIT1002_03659	0.33	-1.1
4,093,269	-		MIT1002_03659	0.33	-1.0
4,093,269	-		MIT1002_03659	0.33	+0.6
4,093,272	+		MIT1002_03659	0.34	-2.1
4,093,279	+		MIT1002_03659	0.34	-0.2
4,093,289	+		MIT1002_03659	0.35	-0.2
4,093,289	+		MIT1002_03659	0.35	-1.5
4,093,304	-		MIT1002_03659	0.36	+0.2
4,093,331	-		MIT1002_03659	0.38	-1.4
4,093,397	+		MIT1002_03659	0.43	+0.3
4,093,405	-		MIT1002_03659	0.44	-0.1
4,093,593	-		MIT1002_03659	0.58	+1.1