Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03278

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2
3,651,160	+		MIT1002_03277	0.21	+0.2
3,651,168	+		MIT1002_03277	0.22	+0.4
3,651,175	+		MIT1002_03277	0.22	+0.7
3,651,219	-		MIT1002_03277	0.27	+1.1
3,651,224	-		MIT1002_03277	0.28	-0.3
3,651,252	-		MIT1002_03277	0.31	+0.1
3,651,361	+		MIT1002_03277	0.42	+0.1
3,651,501	-		MIT1002_03277	0.57	-1.1
3,651,520	+		MIT1002_03277	0.59	+0.3
3,651,576	+		MIT1002_03277	0.65	+0.4
3,651,594	+		MIT1002_03277	0.67	+0.6
3,651,604	-		MIT1002_03277	0.68	+0.3
3,651,773	+		MIT1002_03277	0.86	+0.5
3,651,842	-				-0.1
3,651,973	-				-0.6
3,652,029	+				-0.4
3,652,048	-				+1.5
3,652,048	-				+0.6
3,652,056	+				+0.1
3,652,064	-				+0.7
3,652,095	+		MIT1002_03278	0.10	-0.4
3,652,100	+		MIT1002_03278	0.11	-0.3
3,652,168	+		MIT1002_03278	0.25	+0.7
3,652,225	+		MIT1002_03278	0.37	+0.4
3,652,255	+		MIT1002_03278	0.43	-1.3
3,652,255	+		MIT1002_03278	0.43	-0.3
3,652,255	+		MIT1002_03278	0.43	-0.3
3,652,263	-		MIT1002_03278	0.44	-1.2
3,652,263	-		MIT1002_03278	0.44	-0.7
3,652,308	-		MIT1002_03278	0.53	+0.1
3,652,440	-		MIT1002_03278	0.80	+1.4
3,652,447	-		MIT1002_03278	0.81	-1.6
3,652,457	-		MIT1002_03278	0.83	+0.2
3,652,566	+				-0.8
3,652,586	+				-2.6
3,652,661	+				-0.3
3,652,734	-				-0.6
3,652,744	-				+0.0
3,652,791	+				+0.4
3,652,791	+				-0.1
3,652,840	-				-0.1
3,652,881	+				-1.1
3,652,886	+				-3.0
3,652,914	-				-2.5
3,652,946	+				+0.4
3,652,954	-				+0.6
3,652,959	-				-2.8
3,652,970	+				-1.0
3,652,978	-				-0.7
3,653,001	+				+0.7
3,653,071	+		MIT1002_03279	0.13	-1.4
3,653,092	-		MIT1002_03279	0.14	-2.2
3,653,099	+		MIT1002_03279	0.15	-1.8
3,653,107	-		MIT1002_03279	0.15	-1.8
3,653,107	-		MIT1002_03279	0.15	-0.4
3,653,180	+		MIT1002_03279	0.19	-1.6
3,653,180	+		MIT1002_03279	0.19	-0.7
3,653,215	-		MIT1002_03279	0.21	-1.8
3,653,264	-		MIT1002_03279	0.24	-1.0
3,653,321	+		MIT1002_03279	0.27	-1.3
3,653,329	-		MIT1002_03279	0.28	-0.4
3,653,331	+		MIT1002_03279	0.28	-1.5
3,653,340	+		MIT1002_03279	0.28	-0.5
3,653,348	-		MIT1002_03279	0.29	+0.7
3,653,348	-		MIT1002_03279	0.29	-1.2
3,653,348	-		MIT1002_03279	0.29	+2.4
3,653,400	+		MIT1002_03279	0.32	+1.3
3,653,400	+		MIT1002_03279	0.32	-3.5
3,653,408	-		MIT1002_03279	0.32	-1.3