Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02815

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2
3,120,011	+		MIT1002_02814	0.46	-0.7
3,120,015	+		MIT1002_02814	0.46	-0.0
3,120,023	-		MIT1002_02814	0.47	+1.2
3,120,031	+		MIT1002_02814	0.48	+0.7
3,120,031	+		MIT1002_02814	0.48	+0.4
3,120,039	-		MIT1002_02814	0.49	+0.4
3,120,091	-		MIT1002_02814	0.54	+0.1
3,120,165	+		MIT1002_02814	0.61	-2.3
3,120,174	-		MIT1002_02814	0.62	-1.1
3,120,176	+		MIT1002_02814	0.62	-0.4
3,120,181	+		MIT1002_02814	0.62	-0.2
3,120,188	-		MIT1002_02814	0.63	-1.1
3,120,213	+		MIT1002_02814	0.65	-1.1
3,120,308	+		MIT1002_02814	0.74	-0.3
3,120,313	-		MIT1002_02814	0.75	-2.6
3,120,317	+		MIT1002_02814	0.75	-3.8
3,120,317	+		MIT1002_02814	0.75	-1.6
3,120,325	-		MIT1002_02814	0.76	+0.0
3,120,325	-		MIT1002_02814	0.76	-0.3
3,120,391	-		MIT1002_02814	0.82	-1.0
3,120,408	-		MIT1002_02814	0.84	-2.6
3,120,451	+		MIT1002_02814	0.88	-1.6
3,120,457	-		MIT1002_02814	0.89	-1.8
3,120,514	-				+0.2
3,120,516	-				-0.3
3,120,518	+				+0.2
3,120,521	-				+0.0
3,120,523	+				-0.3
3,120,866	+				+1.0
3,120,914	+				+0.0
3,120,921	-				+0.5
3,120,924	+				-0.2
3,121,009	+				-0.3
3,121,035	-				+0.3
3,121,164	-		MIT1002_02815	0.55	-1.9
3,121,166	+		MIT1002_02815	0.56	-2.6
3,121,172	+		MIT1002_02815	0.58	-1.0
3,121,174	-		MIT1002_02815	0.59	-1.4
3,121,279	+				-0.5
3,121,381	+				-2.4
3,121,386	+				+0.9
3,121,389	-				+0.1
3,121,394	-				-3.7
3,121,400	+				-0.2
3,121,417	+				-0.5
3,121,447	+				+0.9
3,121,453	-				-0.4
3,121,493	+				+0.2
3,121,496	-				+1.9
3,121,564	+				-0.2
3,121,574	+				-1.3
3,121,583	-				+0.6
3,121,631	+		MIT1002_02816	0.19	+0.8
3,121,655	+		MIT1002_02816	0.26	-0.3
3,121,663	-		MIT1002_02816	0.28	-1.8
3,121,684	+		MIT1002_02816	0.33	+0.6
3,121,684	+		MIT1002_02816	0.33	-0.5
3,121,684	+		MIT1002_02816	0.33	-2.1
3,121,696	+		MIT1002_02816	0.36	+0.0
3,121,697	-		MIT1002_02816	0.36	+0.4
3,121,739	-		MIT1002_02816	0.47	-0.6
3,121,821	+		MIT1002_02816	0.68	+0.3
3,121,821	+		MIT1002_02816	0.68	+0.5
3,121,821	+		MIT1002_02816	0.68	+0.3
3,121,821	+		MIT1002_02816	0.68	-0.1
3,121,821	+		MIT1002_02816	0.68	-1.2
3,121,829	-		MIT1002_02816	0.70	-0.6
3,121,829	-		MIT1002_02816	0.70	-0.1
3,122,031	+				-0.4
3,122,039	-		MIT1002_02817	0.10	-1.8
3,122,123	-		MIT1002_02817	0.23	-2.1
3,122,140	-		MIT1002_02817	0.25	-2.3
3,122,161	+		MIT1002_02817	0.28	-1.7
3,122,229	+		MIT1002_02817	0.38	-2.8
3,122,229	+		MIT1002_02817	0.38	-1.1