Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02593

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 2
2,892,440	-		MIT1002_02591	0.75	+1.3
2,892,562	+				+2.4
2,892,570	-				+0.3
2,893,439	-				-0.1
2,893,450	-				-0.4
2,893,560	+				-0.4
2,893,590	+				-0.5
2,893,615	+				-0.2
2,893,623	-				+0.4
2,893,702	-		MIT1002_02593	0.14	-1.1
2,893,709	+		MIT1002_02593	0.14	-3.3
2,893,771	+		MIT1002_02593	0.17	-0.4
2,893,779	-		MIT1002_02593	0.18	-2.9
2,893,779	-		MIT1002_02593	0.18	-0.2
2,893,779	-		MIT1002_02593	0.18	+0.1
2,893,810	-		MIT1002_02593	0.19	+0.6
2,893,810	-		MIT1002_02593	0.19	-0.6
2,894,018	-		MIT1002_02593	0.30	-0.8
2,894,018	-		MIT1002_02593	0.30	-2.0
2,894,026	-		MIT1002_02593	0.31	+1.1
2,894,057	-		MIT1002_02593	0.32	+0.5
2,894,059	+		MIT1002_02593	0.32	+0.8
2,894,201	-		MIT1002_02593	0.40	-1.4
2,894,252	+		MIT1002_02593	0.42	-0.9
2,894,323	-		MIT1002_02593	0.46	-0.0
2,894,340	-		MIT1002_02593	0.47	+1.3
2,894,402	+		MIT1002_02593	0.50	-1.5
2,894,466	-		MIT1002_02593	0.53	-0.2
2,894,466	-		MIT1002_02593	0.53	+0.2
2,894,466	-		MIT1002_02593	0.53	+1.0
2,894,489	-		MIT1002_02593	0.55	-0.2
2,894,571	+		MIT1002_02593	0.59	-0.0
2,894,574	+		MIT1002_02593	0.59	-2.3
2,894,579	-		MIT1002_02593	0.59	+0.6
2,894,579	-		MIT1002_02593	0.59	-0.4
2,894,579	-		MIT1002_02593	0.59	-0.6
2,894,579	-		MIT1002_02593	0.59	-0.2
2,894,579	-		MIT1002_02593	0.59	-3.2
2,894,716	+		MIT1002_02593	0.67	+0.6
2,894,729	-		MIT1002_02593	0.67	+0.3
2,894,731	-		MIT1002_02593	0.67	-0.4
2,894,847	+		MIT1002_02593	0.73	+0.3
2,894,857	+		MIT1002_02593	0.74	-2.1
2,894,857	+		MIT1002_02593	0.74	-1.0
2,894,857	+		MIT1002_02593	0.74	+0.0
2,894,865	-		MIT1002_02593	0.74	-0.8
2,894,865	-		MIT1002_02593	0.74	-0.2
2,894,900	+		MIT1002_02593	0.76	-1.4
2,894,901	+		MIT1002_02593	0.76	-0.4
2,894,908	-		MIT1002_02593	0.77	+0.3
2,894,942	-		MIT1002_02593	0.78	+1.0
2,894,969	+		MIT1002_02593	0.80	-2.2
2,894,989	+		MIT1002_02593	0.81	-0.6
2,894,989	+		MIT1002_02593	0.81	-0.2
2,894,989	+		MIT1002_02593	0.81	-1.5
2,895,005	+		MIT1002_02593	0.82	+0.1
2,895,010	+		MIT1002_02593	0.82	-0.7
2,895,013	-		MIT1002_02593	0.82	-0.2
2,895,025	+		MIT1002_02593	0.83	-0.0
2,895,028	-		MIT1002_02593	0.83	+0.0
2,895,045	+		MIT1002_02593	0.84	-0.7
2,895,053	-		MIT1002_02593	0.84	+1.2
2,895,082	-		MIT1002_02593	0.86	-1.6
2,895,121	+		MIT1002_02593	0.88	-2.0
2,895,252	+				-0.5
2,895,325	+				+1.0
2,895,358	+				+0.2
2,895,360	+				+1.8
2,895,367	-				+0.3
2,895,386	-				+0.8
2,895,433	-				+0.6
2,895,461	+				+1.2
2,895,625	-				-0.0
2,895,632	+				-0.2
2,895,640	-		MIT1002_02594	0.12	+1.2
2,895,646	-		MIT1002_02594	0.15	-0.2
2,895,656	-		MIT1002_02594	0.19	-0.5
2,895,706	-		MIT1002_02594	0.40	-0.7
2,895,769	+		MIT1002_02594	0.66	-0.2
2,895,785	+		MIT1002_02594	0.72	+3.7
2,895,795	-		MIT1002_02594	0.77	-2.0
2,895,815	+		MIT1002_02594	0.85	+0.1
2,895,840	+				-0.7
2,895,848	-				-0.5
2,895,882	+				-0.5
2,895,961	+				+0.4
2,896,046	-				+0.6
2,896,241	-		MIT1002_02595	0.26	+0.6
2,896,350	+		MIT1002_02595	0.37	-0.3
2,896,351	+		MIT1002_02595	0.37	+0.7