Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06968 and MPMX19_06969 overlap by 4 nucleotides MPMX19_06969 and MPMX19_06970 are separated by 8 nucleotides MPMX19_06970 and MPMX19_06971 are separated by 23 nucleotides
MPMX19_06968: MPMX19_06968 - hypothetical protein, at 245,250 to 246,743
_06968
MPMX19_06969: MPMX19_06969 - hypothetical protein, at 246,740 to 246,994
_06969
MPMX19_06970: MPMX19_06970 - putative ABC transporter ATP-binding protein YknY, at 247,003 to 247,695
_06970
MPMX19_06971: MPMX19_06971 - Macrolide export ATP-binding/permease protein MacB, at 247,719 to 248,921
_06971
Position (kb) 246
247 Strain fitness (log2 ratio) -2
-1
0
1 at 245.775 kb on + strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 246.165 kb on + strand, within MPMX19_06968 at 246.166 kb on - strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.657 kb on + strand at 246.657 kb on + strand at 246.657 kb on + strand at 246.658 kb on - strand at 246.658 kb on - strand at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.918 kb on - strand, within MPMX19_06969 at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.284 kb on - strand, within MPMX19_06970
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum remove 245,775 + MPMX19_06968 0.35 -1.5 245,776 - MPMX19_06968 0.35 -0.3 245,776 - MPMX19_06968 0.35 -1.2 245,776 - MPMX19_06968 0.35 -0.9 245,835 + MPMX19_06968 0.39 +0.5 245,835 + MPMX19_06968 0.39 +0.5 245,835 + MPMX19_06968 0.39 -1.8 245,836 - MPMX19_06968 0.39 -1.4 245,836 - MPMX19_06968 0.39 -0.6 245,836 - MPMX19_06968 0.39 +0.1 245,836 - MPMX19_06968 0.39 -1.3 246,165 + MPMX19_06968 0.61 -0.2 246,166 - MPMX19_06968 0.61 -0.7 246,501 + MPMX19_06968 0.84 -0.8 246,501 + MPMX19_06968 0.84 -1.5 246,502 - MPMX19_06968 0.84 +0.3 246,502 - MPMX19_06968 0.84 +0.3 246,502 - MPMX19_06968 0.84 +0.1 246,502 - MPMX19_06968 0.84 -1.6 246,657 + +0.5 246,657 + -0.6 246,657 + -0.2 246,658 - -0.0 246,658 - -1.5 246,917 + MPMX19_06969 0.69 -0.0 246,917 + MPMX19_06969 0.69 -0.9 246,917 + MPMX19_06969 0.69 -0.6 246,918 - MPMX19_06969 0.70 -1.3 247,032 + -1.5 247,032 + -0.2 247,032 + -0.1 247,032 + -2.0 247,033 - -0.8 247,033 - -2.2 247,033 - -0.6 247,033 - -2.0 247,033 - +0.5 247,033 - -0.4 247,033 - -0.9 247,284 - MPMX19_06970 0.41 -1.5
Or see this region's nucleotide sequence