Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02425

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,544,611	+				-0.1
2,544,611	+				-1.9
2,544,611	+				-0.1
2,544,611	+				-1.2
2,544,611	+				-0.2
2,544,611	+				-0.9
2,544,611	+				-0.8
2,544,611	+				-2.3
2,544,612	-				-0.9
2,544,612	-				-1.7
2,544,612	-				-0.8
2,544,612	-				-0.4
2,544,612	-				-0.9
2,544,612	-				-0.8
2,544,612	-				-1.0
2,544,612	-				+0.4
2,544,612	-				-0.7
2,544,612	-				-1.3
2,544,625	+				-0.7
2,544,625	+				-0.9
2,544,626	-				-1.7
2,544,753	+				-0.1
2,544,753	+				-0.5
2,544,753	+				-2.2
2,544,753	+				-0.7
2,544,753	+				-0.1
2,544,753	+				-1.3
2,544,754	-				+0.6
2,545,023	+		MPMX19_02424	0.30	+1.1
2,545,023	+		MPMX19_02424	0.30	+0.1
2,545,047	+		MPMX19_02424	0.33	+1.7
2,545,047	+		MPMX19_02424	0.33	+0.7
2,545,047	+		MPMX19_02424	0.33	+3.7
2,545,047	+		MPMX19_02424	0.33	-0.3
2,545,047	+		MPMX19_02424	0.33	+0.9
2,545,047	+		MPMX19_02424	0.33	-0.1
2,545,047	+		MPMX19_02424	0.33	-0.9
2,545,047	+		MPMX19_02424	0.33	+0.7
2,545,047	+		MPMX19_02424	0.33	+0.7
2,545,047	+		MPMX19_02424	0.33	+1.3
2,545,048	-		MPMX19_02424	0.33	+1.1
2,545,048	-		MPMX19_02424	0.33	-0.7
2,545,048	-		MPMX19_02424	0.33	+0.1
2,545,048	-		MPMX19_02424	0.33	+0.7
2,545,048	-		MPMX19_02424	0.33	+0.7
2,545,048	-		MPMX19_02424	0.33	+0.1
2,545,048	-		MPMX19_02424	0.33	+0.1
2,545,161	+		MPMX19_02424	0.48	+1.3
2,545,161	+		MPMX19_02424	0.48	-0.9
2,545,161	+		MPMX19_02424	0.48	+1.5
2,545,161	+		MPMX19_02424	0.48	+1.7
2,545,162	-		MPMX19_02424	0.48	+1.1
2,545,271	+		MPMX19_02424	0.62	-0.3
2,545,271	+		MPMX19_02424	0.62	+2.2
2,545,272	-		MPMX19_02424	0.62	+0.1
2,545,272	-		MPMX19_02424	0.62	+2.1
2,545,341	+		MPMX19_02424	0.71	+0.9
2,545,342	-		MPMX19_02424	0.71	+1.2
2,545,342	-		MPMX19_02424	0.71	+2.1
2,545,458	-		MPMX19_02424	0.86	+1.7
2,545,560	+				-0.9
2,545,560	+				-0.5
2,545,561	-				-1.5
2,545,561	-				-0.7
2,546,503	-				+0.3
2,546,503	-				+1.7
2,546,503	-				+0.1
2,546,503	-				-1.0
2,546,503	-				-1.7
2,546,503	-				+1.3
2,546,503	-				+0.7
2,546,503	-				-0.1
2,546,503	-				-0.9
2,546,503	-				-1.5
2,546,503	-				+1.1
2,546,503	-				+0.2
2,546,503	-				-0.0
2,546,503	-				+0.2
2,546,505	-				+0.4
2,546,505	-				-0.3
2,546,505	-				-1.7
2,546,505	-				+0.3
2,546,505	-				-0.9
2,546,505	-				-1.3
2,546,505	-				-0.8
2,546,505	-				-0.5
2,546,534	+				+0.1
2,546,534	+				-0.6
2,546,534	+				-1.2
2,546,534	+				+1.4
2,546,534	+				+1.0
2,546,534	+				-0.3
2,546,534	+				+0.2
2,546,534	+				-0.5
2,546,534	+				-0.5
2,546,534	+				+1.2
2,546,534	+				-0.3
2,546,534	+				+0.3
2,546,534	+				-2.5
2,546,534	+				+0.4
2,546,534	+				-0.7
2,546,534	+				-0.9
2,546,534	+				-0.9
2,546,534	+				+1.3
2,546,535	-				-0.3
2,546,535	-				+0.9
2,546,535	-				-0.5
2,546,535	-				-0.5
2,546,535	-				-0.4
2,546,535	-				+1.0
2,546,535	-				+2.2
2,546,535	-				-1.1
2,546,535	-				-1.8
2,546,535	-				-0.5
2,546,535	-				-0.5
2,546,535	-				+0.4
2,546,535	-				-0.9
2,546,535	-				-0.5
2,546,535	-				-0.3
2,546,535	-				-1.8
2,546,535	-				+0.3
2,546,535	-				-0.7
2,546,535	-				+0.3
2,546,535	-				-1.8
2,546,622	+				-0.9
2,546,622	+				-0.7
2,546,622	+				-1.0
2,546,622	+				+0.1
2,546,622	+				-3.3
2,546,622	+				+0.4
2,546,622	+				-0.5
2,546,622	+				-0.7
2,546,622	+				-0.3
2,546,622	+				+0.1
2,546,623	-				-0.7
2,546,623	-				+0.3
2,546,623	-				-1.3
2,546,623	-				+1.0
2,546,623	-				+2.1
2,546,623	-				-2.5
2,546,623	-				-0.7
2,546,623	-				-1.9
2,546,623	-				-0.1
2,546,623	-				-0.8
2,546,812	+		MPMX19_02426	0.78	+0.4
2,546,812	+		MPMX19_02426	0.78	-0.4
2,546,812	+		MPMX19_02426	0.78	-2.0
2,546,812	+		MPMX19_02426	0.78	-1.0
2,546,812	+		MPMX19_02426	0.78	+0.0
2,546,812	+		MPMX19_02426	0.78	-0.0
2,546,812	+		MPMX19_02426	0.78	+0.7
2,546,812	+		MPMX19_02426	0.78	-0.7
2,546,812	+		MPMX19_02426	0.78	-1.3
2,546,812	+		MPMX19_02426	0.78	+0.3
2,546,813	-		MPMX19_02426	0.78	-0.3
2,546,813	-		MPMX19_02426	0.78	-0.2
2,546,813	-		MPMX19_02426	0.78	-0.7
2,546,813	-		MPMX19_02426	0.78	+0.1
2,546,813	-		MPMX19_02426	0.78	+1.7
2,546,813	-		MPMX19_02426	0.78	-1.0
2,546,813	-		MPMX19_02426	0.78	+1.2
2,546,813	-		MPMX19_02426	0.78	-2.2
2,546,813	-		MPMX19_02426	0.78	-1.2
2,546,813	-		MPMX19_02426	0.78	-0.8
2,546,813	-		MPMX19_02426	0.78	+0.9
2,546,813	-		MPMX19_02426	0.78	-0.7
2,546,813	-		MPMX19_02426	0.78	-1.1
2,546,813	-		MPMX19_02426	0.78	+0.7
2,546,813	-		MPMX19_02426	0.78	+0.2
2,546,813	-		MPMX19_02426	0.78	+0.3
2,546,830	+		MPMX19_02426	0.84	-0.5
2,546,830	+		MPMX19_02426	0.84	-2.1
2,546,830	+		MPMX19_02426	0.84	-0.3
2,546,830	+		MPMX19_02426	0.84	-1.1
2,546,830	+		MPMX19_02426	0.84	+0.2
2,546,830	+		MPMX19_02426	0.84	-0.7
2,546,831	-		MPMX19_02426	0.85	-0.3
2,546,831	-		MPMX19_02426	0.85	-0.5
2,546,831	-		MPMX19_02426	0.85	-1.0
2,546,832	+		MPMX19_02426	0.85	-1.4
2,546,832	+		MPMX19_02426	0.85	-1.9
2,546,832	+		MPMX19_02426	0.85	-0.7
2,546,832	+		MPMX19_02426	0.85	-0.5
2,546,832	+		MPMX19_02426	0.85	+0.8
2,546,832	+		MPMX19_02426	0.85	-1.5
2,546,832	+		MPMX19_02426	0.85	-1.9
2,546,832	+		MPMX19_02426	0.85	+1.1
2,546,832	+		MPMX19_02426	0.85	-0.3
2,546,832	+		MPMX19_02426	0.85	-1.3
2,546,832	+		MPMX19_02426	0.85	-1.5
2,546,832	+		MPMX19_02426	0.85	+0.3
2,546,832	+		MPMX19_02426	0.85	+0.8
2,546,832	+		MPMX19_02426	0.85	+1.2
2,546,833	-		MPMX19_02426	0.85	+0.4
2,546,833	-		MPMX19_02426	0.85	-0.2
2,546,833	-		MPMX19_02426	0.85	+0.7
2,546,833	-		MPMX19_02426	0.85	-0.8
2,546,833	-		MPMX19_02426	0.85	+0.3
2,546,833	-		MPMX19_02426	0.85	-0.7
2,546,833	-		MPMX19_02426	0.85	+0.3
2,547,097	+		MPMX19_02427	0.27	-2.4
2,547,097	+		MPMX19_02427	0.27	-3.0
2,547,097	+		MPMX19_02427	0.27	-0.5
2,547,097	+		MPMX19_02427	0.27	-0.5
2,547,098	-		MPMX19_02427	0.27	-1.5
2,547,098	-		MPMX19_02427	0.27	-1.0
2,547,178	+		MPMX19_02427	0.38	+0.3
2,547,178	+		MPMX19_02427	0.38	-0.5
2,547,178	+		MPMX19_02427	0.38	-1.0
2,547,178	+		MPMX19_02427	0.38	-0.0
2,547,178	+		MPMX19_02427	0.38	-2.3
2,547,179	-		MPMX19_02427	0.38	+0.5
2,547,179	-		MPMX19_02427	0.38	-0.1
2,547,247	+		MPMX19_02427	0.47	+1.0
2,547,247	+		MPMX19_02427	0.47	-0.3
2,547,247	+		MPMX19_02427	0.47	-0.9
2,547,247	+		MPMX19_02427	0.47	-0.8
2,547,248	-		MPMX19_02427	0.47	+1.2
2,547,248	-		MPMX19_02427	0.47	-0.7
2,547,346	+		MPMX19_02427	0.59	-1.8
2,547,346	+		MPMX19_02427	0.59	-1.1
2,547,346	+		MPMX19_02427	0.59	+1.0
2,547,346	+		MPMX19_02427	0.59	-0.5
2,547,346	+		MPMX19_02427	0.59	+0.7
2,547,346	+		MPMX19_02427	0.59	-1.3
2,547,347	-		MPMX19_02427	0.59	+0.5
2,547,347	-		MPMX19_02427	0.59	-0.5