Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01452

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,521,754	+		MPMX19_01451	0.54	-0.0
1,521,754	+		MPMX19_01451	0.54	-0.3
1,521,754	+		MPMX19_01451	0.54	-0.4
1,521,754	+		MPMX19_01451	0.54	-0.5
1,521,754	+		MPMX19_01451	0.54	+1.3
1,521,754	+		MPMX19_01451	0.54	-1.0
1,521,754	+		MPMX19_01451	0.54	-0.3
1,521,754	+		MPMX19_01451	0.54	-0.8
1,521,755	-		MPMX19_01451	0.54	-0.9
1,521,755	-		MPMX19_01451	0.54	+1.1
1,521,755	-		MPMX19_01451	0.54	+0.0
1,521,755	-		MPMX19_01451	0.54	-0.1
1,521,755	-		MPMX19_01451	0.54	+2.3
1,521,755	-		MPMX19_01451	0.54	-1.0
1,521,755	-		MPMX19_01451	0.54	-1.5
1,522,270	+		MPMX19_01451	0.81	-1.0
1,522,271	-		MPMX19_01451	0.81	-1.7
1,522,271	-		MPMX19_01451	0.81	+0.5
1,522,364	+		MPMX19_01451	0.86	+0.0
1,522,364	+		MPMX19_01451	0.86	-2.2
1,522,365	-		MPMX19_01451	0.86	-2.1
1,522,365	-		MPMX19_01451	0.86	-1.1
1,522,365	-		MPMX19_01451	0.86	+0.8
1,522,365	-		MPMX19_01451	0.86	-0.1
1,522,531	+				+0.5
1,522,531	+				-0.3
1,522,531	+				+0.7
1,522,531	+				-0.1
1,522,531	+				+0.7
1,522,531	+				-0.3
1,522,531	+				+0.2
1,522,531	+				+0.2
1,522,531	+				+1.2
1,522,531	+				+0.2
1,522,531	+				-0.4
1,522,531	+				-1.1
1,522,531	+				-0.7
1,522,531	+				-0.5
1,522,531	+				+1.0
1,522,531	+				-0.8
1,522,532	-				+1.2
1,522,532	-				-0.4
1,522,532	-				+0.3
1,522,532	-				-0.8
1,522,532	-				-0.1
1,522,532	-				-0.3
1,522,532	-				-2.0
1,522,532	-				+0.3
1,522,532	-				-0.9
1,522,532	-				+0.6
1,522,532	-				+0.9
1,522,532	-				-0.5
1,522,532	-				-0.5
1,522,532	-				-0.4
1,522,532	-				+1.0
1,522,532	-				-0.8
1,522,532	-				-1.1
1,522,667	-				+1.1
1,522,667	-				-0.5
1,522,667	-				-1.1
1,522,667	-				+1.1
1,522,667	-				-0.8
1,522,667	-				+0.6
1,522,667	-				+0.2
1,522,667	-				-0.2
1,522,753	-				-0.2
1,522,753	-				-1.2
1,522,753	-				+0.2
1,522,957	-		MPMX19_01452	0.12	+1.2
1,522,957	-		MPMX19_01452	0.12	-1.8
1,523,070	+		MPMX19_01452	0.17	+1.5
1,523,070	+		MPMX19_01452	0.17	-1.5
1,523,070	+		MPMX19_01452	0.17	-0.0
1,523,070	+		MPMX19_01452	0.17	+1.0
1,523,070	+		MPMX19_01452	0.17	+0.5
1,523,070	+		MPMX19_01452	0.17	+1.5
1,523,070	+		MPMX19_01452	0.17	-0.6
1,523,070	+		MPMX19_01452	0.17	+0.2
1,523,071	-		MPMX19_01452	0.17	-0.7
1,523,071	-		MPMX19_01452	0.17	-0.7
1,523,071	-		MPMX19_01452	0.17	-1.0
1,523,071	-		MPMX19_01452	0.17	-0.5
1,523,071	-		MPMX19_01452	0.17	+1.2
1,523,071	-		MPMX19_01452	0.17	-0.0
1,523,071	-		MPMX19_01452	0.17	+0.6
1,523,071	-		MPMX19_01452	0.17	-0.1
1,523,071	-		MPMX19_01452	0.17	+0.6
1,523,071	-		MPMX19_01452	0.17	-1.0
1,523,071	-		MPMX19_01452	0.17	+1.2
1,523,145	+		MPMX19_01452	0.20	+0.7
1,523,145	+		MPMX19_01452	0.20	-0.5
1,523,145	+		MPMX19_01452	0.20	+0.6
1,523,145	+		MPMX19_01452	0.20	-1.7
1,523,145	+		MPMX19_01452	0.20	-1.3
1,523,145	+		MPMX19_01452	0.20	-0.5
1,523,145	+		MPMX19_01452	0.20	-0.1
1,523,145	+		MPMX19_01452	0.20	+0.3
1,523,145	+		MPMX19_01452	0.20	+0.2
1,523,145	+		MPMX19_01452	0.20	+0.7
1,523,146	-		MPMX19_01452	0.20	+0.5
1,523,146	-		MPMX19_01452	0.20	-0.7
1,523,146	-		MPMX19_01452	0.20	+0.9
1,523,146	-		MPMX19_01452	0.20	-0.1
1,523,146	-		MPMX19_01452	0.20	-1.1
1,523,146	-		MPMX19_01452	0.20	-0.1
1,523,146	-		MPMX19_01452	0.20	-0.8
1,523,146	-		MPMX19_01452	0.20	-0.5
1,523,146	-		MPMX19_01452	0.20	-0.6
1,523,271	+		MPMX19_01452	0.25	-0.3
1,523,271	+		MPMX19_01452	0.25	-0.3
1,523,271	+		MPMX19_01452	0.25	+0.5
1,523,271	+		MPMX19_01452	0.25	+1.5
1,523,271	+		MPMX19_01452	0.25	-1.4
1,523,272	-		MPMX19_01452	0.25	+1.3
1,523,272	-		MPMX19_01452	0.25	-0.5
1,523,841	+		MPMX19_01452	0.47	-2.6
1,523,841	+		MPMX19_01452	0.47	-0.4
1,523,841	+		MPMX19_01452	0.47	+0.5
1,523,841	+		MPMX19_01452	0.47	+1.0
1,523,841	+		MPMX19_01452	0.47	-0.6
1,523,841	+		MPMX19_01452	0.47	-1.8
1,523,842	-		MPMX19_01452	0.47	-0.2
1,523,842	-		MPMX19_01452	0.47	-1.1
1,523,842	-		MPMX19_01452	0.47	+0.5
1,523,842	-		MPMX19_01452	0.47	-0.3
1,523,842	-		MPMX19_01452	0.47	+0.8
1,524,085	-		MPMX19_01452	0.56	-1.4
1,524,261	+		MPMX19_01452	0.63	+0.1
1,524,364	-		MPMX19_01452	0.67	+0.1
1,524,364	-		MPMX19_01452	0.67	-0.8
1,524,441	+		MPMX19_01452	0.70	-2.0
1,524,441	+		MPMX19_01452	0.70	-0.6
1,524,442	-		MPMX19_01452	0.70	-0.7
1,524,442	-		MPMX19_01452	0.70	+0.7
1,524,442	-		MPMX19_01452	0.70	+0.4
1,524,442	-		MPMX19_01452	0.70	-1.1
1,524,453	+		MPMX19_01452	0.70	-2.0
1,524,453	+		MPMX19_01452	0.70	-0.3
1,524,738	+		MPMX19_01452	0.81	+0.9
1,524,739	-		MPMX19_01452	0.81	-0.9
1,524,739	-		MPMX19_01452	0.81	-0.8
1,524,739	-		MPMX19_01452	0.81	-0.2
1,524,855	+		MPMX19_01452	0.86	-0.8
1,524,855	+		MPMX19_01452	0.86	+1.8
1,524,855	+		MPMX19_01452	0.86	+1.0
1,524,855	+		MPMX19_01452	0.86	-1.3
1,524,855	+		MPMX19_01452	0.86	+0.5
1,524,855	+		MPMX19_01452	0.86	-0.3
1,524,855	+		MPMX19_01452	0.86	-0.1
1,524,855	+		MPMX19_01452	0.86	-0.1
1,524,855	+		MPMX19_01452	0.86	+1.5
1,524,856	-		MPMX19_01452	0.86	-0.4
1,524,856	-		MPMX19_01452	0.86	-0.4
1,524,856	-		MPMX19_01452	0.86	-1.3
1,524,856	-		MPMX19_01452	0.86	+0.5
1,524,856	-		MPMX19_01452	0.86	-0.1
1,524,856	-		MPMX19_01452	0.86	-0.3
1,524,856	-		MPMX19_01452	0.86	-1.4
1,524,856	-		MPMX19_01452	0.86	-0.2
1,524,856	-		MPMX19_01452	0.86	-1.6
1,525,290	+				-2.1
1,525,290	+				-0.7
1,525,290	+				+0.7
1,525,290	+				+0.5
1,525,291	-				-1.5
1,525,291	-				-0.7
1,525,291	-				+0.8
1,525,291	-				+0.9
1,525,291	-				-0.0
1,525,291	-				-0.8
1,525,291	-				+1.0
1,525,291	-				-1.2
1,525,291	-				-0.0
1,525,291	-				-0.0
1,525,291	-				+0.5
1,525,291	-				+1.1
1,525,305	+				-1.1
1,525,305	+				-0.0
1,525,317	+				-0.2
1,525,317	+				-1.0
1,525,317	+				-0.2
1,525,317	+				-0.9
1,525,317	+				+0.7
1,525,317	+				-0.4
1,525,317	+				-1.5
1,525,317	+				+0.7
1,525,317	+				+1.0
1,525,317	+				+0.4
1,525,317	+				+1.5
1,525,318	-				+0.1
1,525,318	-				-0.5
1,525,318	-				+0.5
1,525,320	+				-2.0
1,525,320	+				-1.2
1,525,320	+				-1.3
1,525,320	+				-0.6
1,525,320	+				-0.5
1,525,320	+				-1.0
1,525,320	+				-0.4
1,525,320	+				-0.5
1,525,321	-				-1.1
1,525,321	-				+1.0
1,525,321	-				-1.8
1,525,321	-				-1.0
1,525,321	-				+0.1
1,525,321	-				+0.9
1,525,321	-				-1.1
1,525,321	-				+0.4
1,525,321	-				-0.2
1,525,321	-				-2.3
1,525,321	-				-0.2
1,525,324	+				-1.4
1,525,324	+				+0.5
1,525,324	+				-0.6
1,525,324	+				-0.6
1,525,324	+				+0.1
1,525,324	+				+0.7
1,525,324	+				+0.7
1,525,324	+				-0.6
1,525,324	+				+0.1
1,525,324	+				-2.8
1,525,324	+				+0.3
1,525,324	+				-0.2
1,525,324	+				+0.3
1,525,324	+				-1.0
1,525,324	+				+0.2
1,525,324	+				-1.0
1,525,324	+				+0.8
1,525,325	-				-0.6
1,525,325	-				+1.0
1,525,325	-				-0.4
1,525,325	-				-1.1
1,525,325	-				-0.5
1,525,325	-				+0.6
1,525,325	-				+0.3
1,525,325	-				+0.5
1,525,325	-				+0.9
1,525,325	-				-0.1
1,525,325	-				+0.5
1,525,325	-				+1.0
1,525,325	-				-0.6
1,525,325	-				-0.2
1,525,325	-				+0.0
1,525,325	-				+0.4
1,525,358	+				-0.0
1,525,358	+				-1.3
1,525,359	-				+0.8
1,525,399	+				-0.6
1,525,399	+				-0.4
1,525,399	+				-0.2
1,525,399	+				-1.0
1,525,399	+				-0.2
1,525,399	+				-1.0
1,525,399	+				+0.8
1,525,399	+				+0.1
1,525,399	+				+0.4
1,525,399	+				+0.1
1,525,399	+				-0.1
1,525,399	+				+0.9
1,525,399	+				-1.1
1,525,399	+				-0.8
1,525,399	+				-1.4
1,525,399	+				+0.2
1,525,399	+				-0.3
1,525,399	+				+1.2
1,525,399	+				-0.5
1,525,399	+				+0.3
1,525,400	-				-0.4
1,525,400	-				+1.2
1,525,400	-				-1.1
1,525,400	-				-0.8
1,525,400	-				-0.0
1,525,400	-				+0.3
1,525,400	-				+0.0
1,525,400	-				-0.8
1,525,400	-				+0.2
1,525,400	-				+0.3
1,525,400	-				-2.1
1,525,400	-				+0.5
1,525,400	-				-0.7
1,525,400	-				+0.2
1,525,400	-				-1.7
1,525,400	-				-1.5
1,525,400	-				-1.3
1,525,400	-				-0.5
1,525,517	+		MPMX19_01453	0.19	+0.5
1,525,517	+		MPMX19_01453	0.19	-0.5
1,525,517	+		MPMX19_01453	0.19	-0.5
1,525,517	+		MPMX19_01453	0.19	-0.6
1,525,517	+		MPMX19_01453	0.19	+1.5
1,525,517	+		MPMX19_01453	0.19	+0.0
1,525,517	+		MPMX19_01453	0.19	+2.1
1,525,517	+		MPMX19_01453	0.19	+1.5
1,525,517	+		MPMX19_01453	0.19	-0.8
1,525,517	+		MPMX19_01453	0.19	-0.5
1,525,517	+		MPMX19_01453	0.19	+0.5
1,525,517	+		MPMX19_01453	0.19	+0.9
1,525,517	+		MPMX19_01453	0.19	+0.3
1,525,517	+		MPMX19_01453	0.19	-0.0
1,525,517	+		MPMX19_01453	0.19	-1.0
1,525,517	+		MPMX19_01453	0.19	-0.1
1,525,517	+		MPMX19_01453	0.19	+0.1
1,525,517	+		MPMX19_01453	0.19	+0.8
1,525,517	+		MPMX19_01453	0.19	-0.1
1,525,517	+		MPMX19_01453	0.19	+0.4
1,525,517	+		MPMX19_01453	0.19	-0.0
1,525,517	+		MPMX19_01453	0.19	-1.9
1,525,517	+		MPMX19_01453	0.19	+0.8
1,525,517	+		MPMX19_01453	0.19	-1.1
1,525,518	-		MPMX19_01453	0.19	-0.7
1,525,518	-		MPMX19_01453	0.19	-1.2
1,525,518	-		MPMX19_01453	0.19	-0.2
1,525,518	-		MPMX19_01453	0.19	-1.3
1,525,518	-		MPMX19_01453	0.19	-0.1
1,525,518	-		MPMX19_01453	0.19	-0.1
1,525,518	-		MPMX19_01453	0.19	+0.4
1,525,518	-		MPMX19_01453	0.19	+0.4
1,525,518	-		MPMX19_01453	0.19	-1.2
1,525,518	-		MPMX19_01453	0.19	-2.4
1,525,518	-		MPMX19_01453	0.19	-1.2
1,525,518	-		MPMX19_01453	0.19	-0.2
1,525,518	-		MPMX19_01453	0.19	-1.2
1,525,518	-		MPMX19_01453	0.19	-0.1
1,525,518	-		MPMX19_01453	0.19	+0.2
1,525,518	-		MPMX19_01453	0.19	-0.9
1,525,518	-		MPMX19_01453	0.19	-1.8
1,525,775	+		MPMX19_01453	0.89	-0.1
1,525,776	-		MPMX19_01453	0.89	-1.4
1,525,776	-		MPMX19_01453	0.89	-0.1
1,525,776	-		MPMX19_01453	0.89	+0.3
1,526,001	+		MPMX19_01454	0.36	+0.7
1,526,001	+		MPMX19_01454	0.36	-0.4
1,526,001	+		MPMX19_01454	0.36	-1.1
1,526,001	+		MPMX19_01454	0.36	+0.2
1,526,108	+		MPMX19_01454	0.57	+1.0
1,526,109	-		MPMX19_01454	0.57	+0.8
1,526,109	-		MPMX19_01454	0.57	+0.5