Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01423

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,485,889	+				-1.8
1,485,889	+				+0.7
1,485,889	+				-2.1
1,485,889	+				-0.9
1,485,889	+				-0.2
1,485,890	-				-0.4
1,485,890	-				-0.5
1,485,890	-				+0.8
1,485,975	-				-0.5
1,485,998	+				-0.5
1,486,005	+				-1.1
1,486,005	+				+1.5
1,486,005	+				+1.6
1,486,006	-				+0.2
1,486,006	-				+0.5
1,486,006	-				+0.3
1,486,048	+				+0.6
1,486,216	+		MPMX19_01422	0.23	-0.0
1,486,216	+		MPMX19_01422	0.23	+0.3
1,486,216	+		MPMX19_01422	0.23	-0.5
1,486,216	+		MPMX19_01422	0.23	-1.4
1,486,216	+		MPMX19_01422	0.23	-0.8
1,486,216	+		MPMX19_01422	0.23	+0.9
1,486,216	+		MPMX19_01422	0.23	-1.0
1,486,216	+		MPMX19_01422	0.23	-0.1
1,486,216	+		MPMX19_01422	0.23	+0.2
1,486,216	+		MPMX19_01422	0.23	+0.5
1,486,217	-		MPMX19_01422	0.24	+0.4
1,486,217	-		MPMX19_01422	0.24	-0.4
1,486,217	-		MPMX19_01422	0.24	-1.3
1,486,217	-		MPMX19_01422	0.24	+1.2
1,486,217	-		MPMX19_01422	0.24	-0.3
1,486,217	-		MPMX19_01422	0.24	+1.5
1,486,217	-		MPMX19_01422	0.24	-1.2
1,486,217	-		MPMX19_01422	0.24	-0.8
1,486,217	-		MPMX19_01422	0.24	+1.2
1,486,217	-		MPMX19_01422	0.24	-0.1
1,486,217	-		MPMX19_01422	0.24	-1.8
1,486,217	-		MPMX19_01422	0.24	-3.2
1,486,217	-		MPMX19_01422	0.24	+0.5
1,486,217	-		MPMX19_01422	0.24	-1.1
1,486,217	-		MPMX19_01422	0.24	-1.0
1,486,219	+		MPMX19_01422	0.24	-0.7
1,486,219	+		MPMX19_01422	0.24	-1.7
1,486,219	+		MPMX19_01422	0.24	-3.3
1,486,220	-		MPMX19_01422	0.24	-1.3
1,486,220	-		MPMX19_01422	0.24	+0.2
1,486,220	-		MPMX19_01422	0.24	-1.1
1,486,220	-		MPMX19_01422	0.24	-1.1
1,486,220	-		MPMX19_01422	0.24	-0.2
1,486,348	+		MPMX19_01422	0.42	-2.0
1,486,348	+		MPMX19_01422	0.42	+0.6
1,486,348	+		MPMX19_01422	0.42	+1.1
1,486,348	+		MPMX19_01422	0.42	+0.1
1,486,348	+		MPMX19_01422	0.42	-2.2
1,486,348	+		MPMX19_01422	0.42	+0.2
1,486,349	-		MPMX19_01422	0.42	+0.1
1,486,349	-		MPMX19_01422	0.42	-1.3
1,486,349	-		MPMX19_01422	0.42	-0.8
1,486,349	-		MPMX19_01422	0.42	-2.6
1,486,349	-		MPMX19_01422	0.42	-1.1
1,486,349	-		MPMX19_01422	0.42	-0.6
1,486,349	-		MPMX19_01422	0.42	-1.1
1,486,349	-		MPMX19_01422	0.42	-0.1
1,486,349	-		MPMX19_01422	0.42	-0.1
1,486,349	-		MPMX19_01422	0.42	-0.7
1,486,349	-		MPMX19_01422	0.42	+0.1
1,486,354	+		MPMX19_01422	0.42	-0.7
1,486,354	+		MPMX19_01422	0.42	+0.5
1,486,354	+		MPMX19_01422	0.42	-0.3
1,486,354	+		MPMX19_01422	0.42	-0.5
1,486,355	-		MPMX19_01422	0.43	-1.0
1,486,355	-		MPMX19_01422	0.43	-2.3
1,486,355	-		MPMX19_01422	0.43	+1.5
1,486,355	-		MPMX19_01422	0.43	-1.2
1,486,355	-		MPMX19_01422	0.43	-2.8
1,486,355	-		MPMX19_01422	0.43	-0.4
1,486,355	-		MPMX19_01422	0.43	+0.3
1,486,355	-		MPMX19_01422	0.43	-0.8
1,486,355	-		MPMX19_01422	0.43	-1.3
1,486,470	+		MPMX19_01422	0.59	-0.8
1,486,559	+		MPMX19_01422	0.71	+0.8
1,486,559	+		MPMX19_01422	0.71	+0.8
1,486,559	+		MPMX19_01422	0.71	-1.1
1,486,559	+		MPMX19_01422	0.71	-0.6
1,486,559	+		MPMX19_01422	0.71	+0.1
1,486,559	+		MPMX19_01422	0.71	+0.9
1,486,559	+		MPMX19_01422	0.71	-1.5
1,486,559	+		MPMX19_01422	0.71	+0.0
1,486,559	+		MPMX19_01422	0.71	-1.3
1,486,559	+		MPMX19_01422	0.71	-1.7
1,486,559	+		MPMX19_01422	0.71	+0.1
1,486,559	+		MPMX19_01422	0.71	+0.4
1,486,559	+		MPMX19_01422	0.71	-1.1
1,486,559	+		MPMX19_01422	0.71	+0.6
1,486,559	+		MPMX19_01422	0.71	-0.3
1,486,559	+		MPMX19_01422	0.71	+0.2
1,486,559	+		MPMX19_01422	0.71	-0.4
1,486,559	+		MPMX19_01422	0.71	-0.3
1,486,559	+		MPMX19_01422	0.71	+0.3
1,486,559	+		MPMX19_01422	0.71	-1.7
1,486,559	+		MPMX19_01422	0.71	+1.5
1,486,559	+		MPMX19_01422	0.71	-0.8
1,486,559	+		MPMX19_01422	0.71	-1.8
1,486,559	+		MPMX19_01422	0.71	+0.5
1,486,559	+		MPMX19_01422	0.71	-2.2
1,486,559	+		MPMX19_01422	0.71	-0.4
1,486,559	+		MPMX19_01422	0.71	-0.0
1,486,559	+		MPMX19_01422	0.71	+0.7
1,486,559	+		MPMX19_01422	0.71	-0.0
1,486,559	+		MPMX19_01422	0.71	-0.3
1,486,559	+		MPMX19_01422	0.71	-0.3
1,486,559	+		MPMX19_01422	0.71	-1.7
1,486,559	+		MPMX19_01422	0.71	+0.3
1,486,559	+		MPMX19_01422	0.71	+0.2
1,486,559	+		MPMX19_01422	0.71	-0.4
1,486,560	-		MPMX19_01422	0.71	-0.8
1,486,560	-		MPMX19_01422	0.71	+0.2
1,486,560	-		MPMX19_01422	0.71	+1.2
1,486,560	-		MPMX19_01422	0.71	-0.3
1,486,560	-		MPMX19_01422	0.71	+0.3
1,486,560	-		MPMX19_01422	0.71	+0.5
1,486,560	-		MPMX19_01422	0.71	-3.0
1,486,560	-		MPMX19_01422	0.71	-0.1
1,486,560	-		MPMX19_01422	0.71	-0.2
1,486,560	-		MPMX19_01422	0.71	+0.5
1,486,560	-		MPMX19_01422	0.71	+0.2
1,486,560	-		MPMX19_01422	0.71	+0.1
1,486,560	-		MPMX19_01422	0.71	-2.0
1,486,560	-		MPMX19_01422	0.71	+0.9
1,486,560	-		MPMX19_01422	0.71	+0.8
1,486,560	-		MPMX19_01422	0.71	-0.7
1,486,560	-		MPMX19_01422	0.71	+0.7
1,486,560	-		MPMX19_01422	0.71	-0.4
1,486,560	-		MPMX19_01422	0.71	+1.2
1,486,560	-		MPMX19_01422	0.71	-0.8
1,486,560	-		MPMX19_01422	0.71	+0.1
1,486,560	-		MPMX19_01422	0.71	+1.7
1,486,560	-		MPMX19_01422	0.71	-1.0
1,486,560	-		MPMX19_01422	0.71	-0.1
1,486,560	-		MPMX19_01422	0.71	+0.3
1,486,560	-		MPMX19_01422	0.71	-1.2
1,486,560	-		MPMX19_01422	0.71	+0.1
1,486,560	-		MPMX19_01422	0.71	-0.4
1,486,560	-		MPMX19_01422	0.71	-0.2
1,486,560	-		MPMX19_01422	0.71	-1.3
1,486,560	-		MPMX19_01422	0.71	-1.1
1,486,560	-		MPMX19_01422	0.71	-1.8
1,486,560	-		MPMX19_01422	0.71	-0.3
1,486,560	-		MPMX19_01422	0.71	-0.4
1,486,560	-		MPMX19_01422	0.71	+0.4
1,486,560	-		MPMX19_01422	0.71	-1.5
1,486,560	-		MPMX19_01422	0.71	-0.5
1,486,560	-		MPMX19_01422	0.71	-1.7
1,486,560	-		MPMX19_01422	0.71	-0.8
1,486,560	-		MPMX19_01422	0.71	+0.7
1,486,700	+				-1.8
1,486,700	+				-0.9
1,486,700	+				-0.3
1,486,701	-				+3.1
1,486,701	-				-0.1
1,486,701	-				-0.7
1,486,813	+				-0.1
1,486,813	+				-0.6
1,486,813	+				-2.2
1,486,813	+				-1.0
1,486,813	+				+0.9
1,486,813	+				-2.1
1,486,813	+				-1.1
1,486,814	-				-0.8
1,486,814	-				-2.0
1,486,814	-				-0.2
1,486,814	-				+0.0
1,486,814	-				-0.7
1,486,814	-				-0.8
1,486,814	-				-0.6
1,486,814	-				-1.6
1,486,814	-				-0.6
1,486,814	-				+0.1
1,486,814	-				+1.8
1,486,862	+				+0.2
1,486,862	+				-1.8
1,486,863	-				-0.7
1,487,129	+		MPMX19_01423	0.77	-1.1
1,487,129	+		MPMX19_01423	0.77	-0.1
1,487,130	-		MPMX19_01423	0.77	-1.6
1,487,130	-		MPMX19_01423	0.77	-0.3
1,487,145	+		MPMX19_01423	0.82	+0.5
1,487,145	+		MPMX19_01423	0.82	-1.3
1,487,157	+				-0.8
1,487,157	+				-0.3
1,487,157	+				-0.1
1,487,157	+				+0.6
1,487,157	+				+0.2
1,487,157	+				-0.3
1,487,158	-				+0.1
1,487,158	-				-1.0
1,487,158	-				+1.3
1,487,158	-				-1.3
1,487,158	-				-1.2
1,487,158	-				-0.4
1,487,158	-				-1.7
1,487,158	-				+0.2
1,487,158	-				-1.2
1,487,243	+				-0.3
1,487,243	+				+0.6
1,487,243	+				+0.3
1,487,243	+				-0.4
1,487,243	+				+0.8
1,487,244	-				-0.7
1,487,244	-				-0.9
1,487,244	-				-2.2
1,487,244	-				-0.2
1,487,296	-		MPMX19_01424	0.10	-2.3
1,487,881	-		MPMX19_01424	0.52	-0.5
1,487,881	-		MPMX19_01424	0.52	+0.2
1,487,919	+		MPMX19_01424	0.55	+1.2
1,487,919	+		MPMX19_01424	0.55	-1.2
1,487,919	+		MPMX19_01424	0.55	+0.5
1,487,919	+		MPMX19_01424	0.55	-0.7
1,487,919	+		MPMX19_01424	0.55	-1.0
1,487,919	-		MPMX19_01424	0.55	-0.0
1,487,920	-		MPMX19_01424	0.55	-2.3
1,487,937	+		MPMX19_01424	0.56	+0.5
1,487,938	-		MPMX19_01424	0.56	+0.6
1,488,175	+		MPMX19_01424	0.73	-1.5
1,488,175	+		MPMX19_01424	0.73	-0.0
1,488,175	+		MPMX19_01424	0.73	-0.3
1,488,175	+		MPMX19_01424	0.73	+0.9
1,488,175	+		MPMX19_01424	0.73	-1.1
1,488,175	+		MPMX19_01424	0.73	-0.5
1,488,175	+		MPMX19_01424	0.73	+0.4
1,488,175	+		MPMX19_01424	0.73	+0.7
1,488,175	+		MPMX19_01424	0.73	-0.8
1,488,175	+		MPMX19_01424	0.73	-1.2
1,488,175	+		MPMX19_01424	0.73	-0.2
1,488,175	+		MPMX19_01424	0.73	-0.3
1,488,176	-		MPMX19_01424	0.73	-0.5
1,488,176	-		MPMX19_01424	0.73	-1.5
1,488,176	-		MPMX19_01424	0.73	-0.7
1,488,176	-		MPMX19_01424	0.73	-0.7
1,488,176	-		MPMX19_01424	0.73	+0.2
1,488,176	-		MPMX19_01424	0.73	-1.2
1,488,176	-		MPMX19_01424	0.73	+0.4
1,488,176	-		MPMX19_01424	0.73	-0.7
1,488,176	-		MPMX19_01424	0.73	-0.8
1,488,176	-		MPMX19_01424	0.73	+0.3
1,488,176	-		MPMX19_01424	0.73	-0.6
1,488,176	-		MPMX19_01424	0.73	+1.5
1,488,176	-		MPMX19_01424	0.73	+0.6
1,488,176	-		MPMX19_01424	0.73	-1.8
1,488,176	-		MPMX19_01424	0.73	+1.6